Input parameters:

  Query = ENSP00000251879 (Len=1165)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000251879, Len=1165):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MYFLSGWPKRLLCPLGSPAEAPFHVQSDPQRAFFAVLAAARLSIWYSRPSVLIVTYKEPAKSSTQFGSYKQAEWRPDSTM 80  
WD40-rpts                                                               (________________WD 1__

Query       81 IAVSTANGYILFFHITSTRGDKYLYEPVYPKGSPQMKGTPHFKEEQCAPALNLEMRKILDLQAPIMSLQSVLEDLLVATS 160 
WD40-rpts      _____________)                                                                  

Query      161 DGLLHLIHWEGMTNGRKAINLCTVPFSVDLQSSRVGSFLGFTDVHIRDMEYCATLDGFAVVFNDGKVGFITPVSSRFTAE 240 
WD40-rpts                                                                              (_______

Query      241 QLHGVWPQDVVDGTCVAVNNKYRLMAFGCVSGSVQVYTIDNSTGAMLLSHKLELTAKQYPDIWNKTGAVKLMRWSPDNSV 320 
WD40-rpts      _____________WD 2____________________)                  (________________WD 3___

Query      321 VIVTWEYGGLSLWSVFGAQLICTLGGDFAYRSDGTKKDPLKINSMSWGAEGYHLWVISGFGSQNTEIESDLRSVVKQPSI 400 
WD40-rpts      _____________)                                                                  

Query      401 LLFQFIKSVLTVNPCMSNQEQVLLQGEDRLYLNCGEASQTQNPRSSSTHSEHKPSREKSPFADGGLESQGLSTLLGHRHW 480 
WD40-rpts                                       (_____________________WD 4_____________________

Query      481 HVVQISSTYLESNWPIRFSAIDKLGQNIAVVGKFGFAHYSLLTKKWKLFGNITQEQNMIVTGGLAWWNDFMVLACYNIND 560 
WD40-rpts      )                                                                               

Query      561 RQEELRVYLRTSNLDNAFAHVTKAQAETLLLSVFQDMVIVFRADCSICLYSIERKSDGPNTTAGIQVLQEVSMSRYIPHP 640 
WD40-rpts                                                                                      

Query      641 FLVVSVTLTSVSTENGITLKMPQQARGAESIMLNLAGQLIMMQRDRSGPQIREKDSNPNNQRKLLPFCPPVVLAQSVENV 720 
WD40-rpts                                                                                      

Query      721 WTTCRANKQKRHLLEALWLSCGGAGMKVWLPLFPRDHRKPHSFLSQRIMLPFHINIYPLAVLFEDALVLGAVNDTLLYDS 800 
WD40-rpts                                                                                      

Query      801 LYTRNNAREQLEVLFPFCVVERTSQIYLHHILRQLLVRNLGEQALLLAQSCATLPYFPHVLELMLHEVLEEEATSREPIP 880 
WD40-rpts                                                                                      

Query      881 DPLLPTVAKFITEFPLFLQTVVHCARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHAT 960 
WD40-rpts                                                                                      

Query      961 LLFNTALEQGKWDLCRHMIRFLKAIGSGESETPPSTPTAQEPSSSGGFEFFRNRSISLSQSAENVPASKFSLQKTLSMPS 1040
WD40-rpts                                                                                      

Query     1041 GPSGKRWSKDSDCAENMYIDMMLWRHARRLLEDVRLKDLGCFAAQLGFELISWLCKERTRAARVDNFVIALKRLHKDFLW 1120
WD40-rpts                                                                                      

Query     1121 PLPIIPASSISSPFKNGKYRTGNVDFMSLVQGELYFTPCIYTFCY 1165
WD40-rpts                                                   

4 WD40-repeats found in QUERY=ENSP00000251879 (Len=1165):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6    58-94       3.58  262.37  0.01799       12.5%     42.51
  WD 2:  Seg 16   233-278      3.68  266.78  0.01571       15.0%     41.63
  WD 3:  Seg 20   297-334      5.01  321.68  0.00287       20.0%     39.22
  WD 4:  Seg 29   434-481      3.57  262.10  0.01814       22.5%      1.95

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   58-94     EPA---K--------SSTQ------FGSYKQAEWRPDSTMIAVSTANGYILFFH
   WD 2  233-278    VSSRFTA--------EQLHGVWPQDVVDGTCVAVNNKYRLMAFGCVSGSVQVYT
   WD 3  297-334    --KQYPD--------IWNK------TGAVKLMRWSPDNSVVIVTWEYGGLSLWS
   WD 4  434-481    CGEASQTQNPRSSSTHSEH------KPSREKSPFADGGLESQGLSTLLGHRHWH

   WD40 Template    TGECLRT--------LSGH------TSGVTSVSFSPDGKRLVSGSEDGTIKVWD