Input parameters:

  Query = ENSP00000253952 (Len=296)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000253952, Len=296):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MERAVPLAVPLGQTEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSSALSSEAKEESKKPVVTFQAHDGPVY 80  
WD40-rpts                   (_________________WD 1________________)             (______________

Query       81 SMVSTDRHLLSAGDGEVKAWLWAEMLKKGCKELWRRQPPYRTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTF 160 
WD40-rpts      __WD 2________________)            (_________________WD 3________________)   (__

Query      161 TRVLRGHTDYIHCLALRERSPEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA 240 
WD40-rpts      _______________WD 4________________)   (____________________WD 5________________

Query      241 LTLWHLRSSTPTTIFPIRAPQKHVTFYQDLVLTAAGNSCRVDVFTNLGYRAFSLSF 296 
WD40-rpts      ____)   (________________WD 6________________)          

6 WD40-repeats found in QUERY=ENSP00000253952 (Len=296):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    14-52       9.21  495.30  1.3e-05       30.0%     50.88
  WD 2:  Seg  6    66-103      6.67  390.19  0.00034       22.5%     48.67
  WD 3:  Seg 11   116-154      8.06  447.71  5.8e-05       12.5%     44.19
  WD 4:  Seg 14   158-196     10.33  541.58  3.1e-06       32.5%     53.40
  WD 5:  Seg 18   200-245      5.66  348.65  0.00125       15.0%     47.95
  WD 6:  Seg 22   249-286      6.29  374.56  0.00056       10.0%     51.04

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   14-52     TEVFQALQRLHMTIFS--------QSVSPCGKFLAAGNNYGQIAIFS
   WD 2   66-103    KKPVVTFQAHDGPVYS--------M-VSTDRHLLSAGDGEVKAWLWA
   WD 3  116-154    RQPPYRTSLEVPEINA--------LLLVPKENSLILAGGDCQLHTMD
   WD 4  158-196    GTFTRVLRGHTDYIHC--------LALRERSPEVLSGGEDGAVRLWD
   WD 5  200-245    AKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGG-GPALTLWH
   WD 6  249-286    STPTTIFPIRAP-QKH--------VTFYQDLVLTAAGNSCRVDVFTN

   WD40 Template    GECLRTLSGHTSGVTS--------VSFSPDGKRLVSGSEDGTIKVWD