Input parameters:
Query = ENSP00000257931 (Len=1201)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000257931, Len=1201):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MNFEGLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEGVYSELHSVVAEVGVPVSVSH 80
WD40-rpts (_________________WD 1_________________) (___________
Query 81 FDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIRQIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHS 160
WD40-rpts ___WD 2_____________)
Query 161 LLLTDSSTLLVGGLQNHIIEIDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKVSLRDLRTFKVEHEFDAFSGSLS 240
WD40-rpts (________________WD 3_______________) (______________
Query 241 DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRLAIISQSGQCQFCEPTGLANP 320
WD40-rpts ______WD 4____________________) (
Query 321 ADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDSPEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPV 400
WD40-rpts _________________WD 5________________)
Query 401 PLTTDTLLSDWPAANSAPAPRRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYRLKESDSEFDSFSQVTESPVGREE 480
WD40-rpts
Query 481 EPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLIQNHLCQKEFCLACEL 560
WD40-rpts
Query 561 GFLFHMLDLSRGDPCQGNNFLRAFRTIPEASALGLILADSDEASGKGNLARLIQRWNRFILTQLHQDMQELEIPQAYRGA 640
WD40-rpts
Query 641 GGSFCSSGDSVIGQLFSCEMENCSLCRCGSETVRASSTLLFTLSYPDGSKSDKTGKNYDFAQVLKRSICLDQNTQAWCDT 720
WD40-rpts
Query 721 CEKYQPTIQTRNIRHLPDILVINCEVNSSKEADFWRMQAEVAFKMAVKKHGGEISKNKEFALADWKELGSPEGVLVCPSI 800
WD40-rpts
Query 801 EELKNVWLPFSIRMKMTKNKGLDVCNWTDGDEMQWGPARAEEEHGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQR 880
WD40-rpts
Query 881 KEGVTHQQWYLFNDFLIEPIDKHEAVQFDMNWKVPAILYYVKRNLNSRYNLNIKNPIEASVLLAEASLARKQRKTHTTFI 960
WD40-rpts
Query 961 PLMLNEMPQIGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQ 1040
WD40-rpts
Query 1041 YSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLA 1120
WD40-rpts
Query 1121 WYFLDLKIQGETHDSIEDARTALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKNAAVFSSVLA 1200
WD40-rpts
Query 1201 L 1201
WD40-rpts
5 WD40-repeats found in QUERY=ENSP00000257931 (Len=1201):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 20-59 3.05 240.55 0.03510 12.5% 11.86
WD 2: Seg 3 69-101 2.88 233.78 0.04314 15.0% 41.46
WD 3: Seg 14 186-222 3.04 240.34 0.03533 17.5% 51.65
WD 4: Seg 18 226-271 3.31 251.56 0.02507 15.0% 31.22
WD 5: Seg 25 320-358 4.11 284.50 0.00909 12.5% 48.12
Multiple sequence alignment of 5 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 20-59 ALDPVLDAHLNPSLLQNVELDPE-------GVALEALPVQESVHIME
WD 2 69-101 -------VAEVGVPVSVSHFDLH-------EEMLWVGSHGGHATSFF
WD 3 186-222 -VQETQKYAVETPGVTIMR--QT-------NRFFFCGHTSGKVSLRD
WD 4 226-271 -FKVEHEFDAFSGSLSDFDVHGNLLAACGFSSRLTGLACDRFLKVYD
WD 5 320-358 -PADIFHVNPVGPLLMTFDVSAS-------KQALAFGDSEGCVHLWT
WD40 Template TGECLRTLSGHTSGVTSVSFSPD-------GKRLVSGSEDGTIKVWD