Input parameters:
Query = ENSP00000260570 (Len=1749)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000260570, Len=1749):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MHLKHLRTLLSPQDGAAKVTCMAWSQNNAKFAVCTVDRVVLLYDEHGERRDKFSTKPADMKYGRKSYMVKGMAFSPDSTK 80
WD40-rpts (_________________WD 1_________________) (_________________WD 2___
Query 81 IAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQWPAEYIIVFGLAEGKVRLANTKTNKSSTIYGTESYVVSLTT 160
WD40-rpts _____________)(____________________WD 3___________________) (_________________W
Query 161 NCSGKGILSGHADGTIVRYFFDDEGSGESQGKLVNHPCPPYALAWATNSIVAAGCDRKIVAYGKEGHMLQTFDYSRDPQE 240
WD40-rpts D 4________________) (________________WD 5_______________) (__________
Query 241 REFTTAVSSPGGQSVVLGSYDRLRVFNWIPRRSIWEEAKPKEITNLYTITALAWKRDGSRLCVGTLCGGVEQFDCCLRRS 320
WD40-rpts ______WD 6________________) (_________________WD 7________________)
Query 321 IYKNKFELTYVGPSQVIVKNLSSGTRVVLKSHYGYEVEEVKILGKERYLVAHTSETLLLGDLNTNRLSEIAWQGSGGNEK 400
WD40-rpts
Query 401 YFFENENVCMIFNAGELTLVEYGNNDTLGSVRTEFMNPHLISVRINERCQRGTEDNKKLAYLIDIKTIAIVDLIGGYNIG 480
WD40-rpts (______________________WD 8______________________) (_____
Query 481 TVSHESRVDWLELNETGHKLLFRDRKLRLHLYDIESCSKTMILNFCSYMQWVPGSDVLVAQNRNSLCVWYNIEAPERVTM 560
WD40-rpts ____________WD 9________________)
Query 561 FTIRGDVIGLERGGGKTEVMVMEGVTTVAYTLDEGLIEFGTAIDDGNYIRATAFLETLEMTPETEAMWKTLSKLALEARQ 640
WD40-rpts
Query 641 LHIAERCFSALGQVAKARFLHETNEIADQVSREYGGEGTDFYQVRARLAMLEKNYKLAEMIFLEQNAVEEAMGMYQELHR 720
WD40-rpts
Query 721 WDECIAVAEAKGHPALEKLRRSYYQWLMDTQQEERAGELQESQGDGLAAISLYLKAGLPAKAARLVLTREELLANTELVE 800
WD40-rpts
Query 801 HITAALIKGELYERAGDLFEKIHNPQKALECYRKGNAFMKAVELARLAFPVEVVKLEEAWGDHLVQQKQLDAAINHYIEA 880
WD40-rpts
Query 881 RCSIKAIEAALGARQWKKAIYILDLQDRNTASKYYPLVAQHYASLQEYEIAEELYTKGDRTKDAIDMYTQAGRWEQAHKL 960
WD40-rpts
Query 961 AMKCMRPEDVSVLYITQAQEMEKQGKYREAERLYVTVQEPDLAITMYKKHKLYDDMIRLVGKHHPDLLSDTHLHLGKELE 1040
WD40-rpts
Query 1041 AEGRLQEAEYHYLEAQEWKATVNMYRASGLWEEAYRVARTQGGANAHKHVAYLWAKSLGGEAAVRLLNKLGLLEAAVDHA 1120
WD40-rpts
Query 1121 ADNCSFEFAFELSRLALKHKTPEVHLKYAMFLEDEGKFEEAEAEFIRAGKPKEAVLMFVHNQDWEAAQRVAEAHDPDSVA 1200
WD40-rpts
Query 1201 EVLVGQARGALEEKDFQKAEGLLLRAQRPGLALNYYKEAGLWSDALRICKDYVPSQLEALQEEYEREATKKGARGVEGFV 1280
WD40-rpts
Query 1281 EQARHWEQAGEYSRAVDCYLKVRDSGNSGLAEKCWMKAAELSIKFLPPQRNMEVVLAVGPQLIGIGKHSAAAELYLNLDL 1360
WD40-rpts
Query 1361 VKEAIDAFIEGEEWNKAKRVAKELDPRYEDYVDQHYKEFLKNQGKVDSLVGVDVIAALDLYVEQGQWDKCIETATKQNYK 1440
WD40-rpts
Query 1441 ILHKYVALYATHLIREGSSAQALALYVQHGAPANPQNFNIYKRIFTDMVSSPGTNCAEAYHSWADLRDVLFNLCENLVKS 1520
WD40-rpts
Query 1521 SEANSPAHEEFKTMLLIAHYYATRSAAQSVKQLETVAARLSVSLLRHTQLLPVDKAFYEAGIAAKAVGWDNMAFIFLNRF 1600
WD40-rpts
Query 1601 LDLTDAIEEGTLDGLDHSDFQDTDIPFEVPLPAKQHVPEAEREEVRDWVLTVSMDQRLEQVLPRDERGAYEASLVAASTG 1680
WD40-rpts
Query 1681 VRALPCLITGYPILRNKIEFKRPGKAANKDNWNKFLMAIKTSHSPVCQDVLKFISQWCGGLPSTSFSFQ 1749
WD40-rpts
9 WD40-repeats found in QUERY=ENSP00000260570 (Len=1749):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 5-44 5.90 358.58 0.00091 15.0% 45.92
WD 2: Seg 5 56-94 6.67 390.02 0.00034 22.5% 46.09
WD 3: Seg 8 95-139 4.52 301.45 0.00538 15.0% 53.99
WD 4: Seg 12 142-180 6.76 393.86 0.00031 32.5% 51.43
WD 5: Seg 16 187-223 4.45 298.37 0.00592 17.5% 45.50
WD 6: Seg 20 230-267 4.13 285.33 0.00886 22.5% 43.99
WD 7: Seg 24 276-314 5.86 356.62 0.00097 22.5% 45.13
WD 8: Seg 38 423-472 3.58 262.70 0.01781 17.5% 44.10
WD 9: Seg 42 475-513 4.82 313.95 0.00365 17.5% 54.04
Multiple sequence alignment of 9 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 5-44 HLR-----TL----------LSPQDGAAKVTCMAWSQNNAKFAVCTVDRVVLLYD
WD 2 56-94 -KP-----AD----------MKYGRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYK
WD 3 95-139 IGEDWGDKKV----------ICNKFIQTSAVTCLQWPAEYIIVFGLAEGKVRLAN
WD 4 142-180 -TN-----KS----------STIYGTESYVVSLTTNCSGKGILSGHADGTIVRYF
WD 5 187-223 -GE-----SQ----------GKLVNHPCPPYALAWATNS--IVAAGCDRKIVAYG
WD 6 230-267 -QT-----FD----------YSRDPQEREFTTAVSSPGGQSVVLGSYD-RLRVFN
WD 7 276-314 -EE-----AK----------PKEITNLYTITALAWKRDGSRLCVGTLCGGVEQFD
WD 8 423-472 GNN-----DTLGSVRTEFMNPHLISVRINERCQRGTEDNKKLAYLIDIKTIAIVD
WD 9 475-513 -GG-----YN----------IGTVSHESRVDWLELNETGHKLLFRDRKLRLHLYD
WD40 Template TGE-----CL----------RTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD