Input parameters:
Query = ENSP00000263150 (Len=494)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000263150, Len=494):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MPTESASCSTARQTKQKRKSHSLSIRRTNSSEQERTGLPRDMLEGQDSKLPSSVRSTLLELFGQIEREFENLYIENLELR 80
WD40-rpts (_______________________________________WD 1__________________
Query 81 REIDTLNERLAAEGQAIDGAELSKGQLKTKASHSTSQLSQKLKTTYKASTSKIVSSFKTTTSRAACQLVKEYIGHRDGIW 160
WD40-rpts ____________________)(________________WD 2_______________) (______________
Query 161 DVSVAKTQPVVLGTASADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTAHIWRYAVQLPTPQPVAD 240
WD40-rpts ___WD 3_________________) (_________________WD 4________________)
Query 241 TSISGEDEVECSDKDEPDLDGDVSSDCPTIRVPLTSLKSHQGVVIASDWLVGGKQAVTASWDRTANLYDVETSELVHSLT 320
WD40-rpts (____________________WD 5___________________) (_______
Query 321 GHDQELTHCCTHPTQRLVVTSSRDTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTVGDNVVSGSDDRTVKVWDLKNMRS 400
WD40-rpts __________WD 6________________) (________________WD 7________________) (__
Query 401 PIATIRTDSAINRINVCVGQKIIALPHDNRQVRLFDMSGVRLARLPRSSRQGHRRMVCCSAWSEDHPVCNLFTCGFDRQA 480
WD40-rpts _______________WD 8________________)(_____________________WD 9__________________
Query 481 IGWNINIPALLQEK 494
WD40-rpts ___)
9 WD40-repeats found in QUERY=ENSP00000263150 (Len=494):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 19-101 2.98 237.80 0.03818 15.0% 17.45
WD 2: Seg 4 102-138 5.09 324.97 0.00260 15.0% 40.46
WD 3: Seg 8 146-185 7.80 437.00 8.0e-05 25.0% 44.07
WD 4: Seg 11 189-227 9.91 524.01 5.4e-06 32.5% 58.11
WD 5: Seg 17 265-309 8.38 460.77 3.8e-05 27.5% 51.04
WD 6: Seg 21 313-351 9.76 517.68 6.6e-06 30.0% 55.82
WD 7: Seg 25 357-394 8.35 459.40 4.0e-05 45.0% 50.73
WD 8: Seg 29 398-436 7.88 440.33 7.2e-05 7.5% 51.57
WD 9: Seg 33 437-484 6.31 375.26 0.00055 20.0% 41.78
Multiple sequence alignment of 9 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 19-101 KSH------S-----LSIRRTNSSEQERTGLPRDMLEGQDS--KLPSSVRSTLLELFGQIEREFENLYIENLELRREIDTLNERLAAEGQAIDGAE
WD 2 102-138 LSK-----GQ-----LKTKASH---------STSQLSQKLK--TTY--------------------------KA------------STSKIVSSFK
WD 3 146-185 -CQ------L-----VKEYIGHRD-----GIWDVSVAKTQP-VVLG--------------------------TA------------SADHTALLWS
WD 4 189-227 -GK------C-----LVKYAGHVG-----SVNSIKFHPSEQ--LAL--------------------------TA------------SGDQTAHIWR
WD 5 265-309 SDC------PTIRVPLTSLKSHQG-----VVIASDWLVGGK--QAV--------------------------TA------------SWDRTANLYD
WD 6 313-351 -SE------L-----VHSLTGHDQ-----ELTHCCTHPTQR--LVV--------------------------TS------------SRDTTFRLWD
WD 7 357-394 -IH------S-----VNVFQGHTD-----TVTSAVFTV-GD--NVV--------------------------SG------------SDDRTVKVWD
WD 8 398-436 -MR------S-----PIATIRTDS-----AINRINVCVGQK--IIA--------------------------LP------------HDNRQVRLFD
WD 9 437-484 MSGVRLARLP-----RSSRQGHRR-----MVCCSAWSEDHPVCNLF--------------------------TC------------GFDRQAIGWN
WD40 Template TGE------C-----LRTLSGHTS-----GVTSVSFSPDGK--RLV--------------------------SG------------SEDGTIKVWD