Input parameters:
Query = ENSP00000263208 (Len=1017)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000263208, Len=1017):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MKLLKPTWVNHNGKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMSPVLQEDDEKDENIPKMLCQMDNHLACVNCVRWSN 80
WD40-rpts (________________WD 1________________) (_________________WD
Query 81 SGMYLASGGDDKLIMVWKRATYIGPSTVFGSSGKLANVEQWRCVSILRNHSGDVMDVAWSPHDAWLASCSVDNTVVIWNA 160
WD40-rpts 2________________) (_________________WD 3________________)
Query 161 VKFPEILATLRGHSGLVKGLTWDPVGKYIASQADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSA 240
WD40-rpts (_________________WD 4________________)(_______________________WD 5__________
Query 241 HAMNNSGPTAQIIEREGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSAKPSCPYCCCAVGSKDRSLSVWLTCLKRPL 320
WD40-rpts _____________) (_________________________WD 6_________________________) (__
Query 321 VVIHELFDKSIMDISWTLNGLGILVCSMDGSVAFLDFSQDELGDPLSEEEKSRIHQSTYGKSLAIMTEAQLSTAVIENPE 400
WD40-rpts _______________WD 7________________)
Query 401 MLKYQRRQQQQQLDQKSAATREMGSATSVAGVVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSTAFFN 480
WD40-rpts (_________________WD 8________________) (________________WD 9___________
Query 481 SIPLSGSLAGTMLSSHSSPQLLPLDSSTPNSFGASKPCTEPVVAASARPAGDSVNKDSMNATSTPAALSPSVLTTPSKIE 560
WD40-rpts _____) (_________________WD10_________
Query 561 PMKAFDSRFTERSKATPGAPALTSMTPTAVERLKEQNLVKELRPRDLLESSSDSDEKVPLAKASSLSKRKLELEVETVEK 640
WD40-rpts _______)
Query 641 KKKGRPRKDSRLMPVSLSVQSPAALTAEKEAMCLSAPALALKLPIPSPQRAFTLQVSSDPSMYIEVENEVTVVGGVKLSR 720
WD40-rpts
Query 721 LKCNREGKEWETVLTSRILTAAGSCDVVCVACEKRMLSVFSTCGRRLLSPILLPSPISTLHCTGSYVMALTAAATLSVWD 800
WD40-rpts (________________WD11________________)(_________________WD12________________)
Query 801 VHRQVVVVKEESLHSILAGSDMTVSQILLTQHGIPVMNLSDGKAYCFNPSLSTWNLVSDKQDSLAQCADFRSSLPSQDAM 880
WD40-rpts (_________________WD13_________________)
Query 881 LCSGPLAIIQGRTSNSGRQAARLFSVPHVVQQETTLAYLENQVAAALTLQSSHEYRHWLLVYARYLVNEGFEYRLREICK 960
WD40-rpts
Query 961 DLLGPVHYSTGSQWESTVVGLRKRELLKELLPVIGQNLRFQRLFTECQEQLDILRDK 1017
WD40-rpts
13 WD40-repeats found in QUERY=ENSP00000263208 (Len=1017):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 7-44 5.47 340.50 0.00160 22.5% 42.53
WD 2: Seg 4 60-98 7.84 438.46 7.7e-05 32.5% 53.45
WD 3: Seg 8 121-159 7.78 436.07 8.3e-05 32.5% 54.65
WD 4: Seg 12 164-202 9.20 494.87 1.3e-05 37.5% 57.24
WD 5: Seg 16 203-254 4.77 311.61 0.00393 35.0% 50.68
WD 6: Seg 20 258-313 5.86 356.84 0.00097 30.0% 57.72
WD 7: Seg 24 318-356 6.76 394.06 0.00030 15.0% 57.22
WD 8: Seg 30 407-445 4.87 315.63 0.00347 10.0% 18.09
WD 9: Seg 31 449-486 4.15 286.06 0.00866 15.0% 22.63
WD10: Seg 34 530-568 2.80 230.50 0.04766 12.5% -5.91
WD11: Seg 39 724-761 3.19 246.24 0.02951 12.5% 43.20
WD12: Seg 43 762-800 5.32 334.53 0.00193 22.5% 34.24
WD13: Seg 47 810-849 4.32 293.22 0.00694 12.5% 41.92
Multiple sequence alignment of 13 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 7-44 TW-----VN--------HNGKPIFSVDIHPD-----------------GTKFATGGQGQD----SGKVVIWN
WD 2 60-98 -PKMLCQMD--------NHLACVNCVRWSNS-----------------GMYLASGG---D----DKLIMVWK
WD 3 121-159 -WRCVSILR--------NHSGDVMDVAWSPH-----------------DAWLASCS---V----DNTVVIWN
WD 4 164-202 -PEILATLR--------GHSGLVKGLTWDPV-----------------GKYIASQA---D----DRSLKVWR
WD 5 203-254 TLDWQLETSITKPFDECGGTTHVLRLSWSPD-----------------GHYLVSAH---AMNNSGPTAQIIE
WD 6 258-313 -WKTNMDFV--------GHRKAVTVVKFNPKIFKKKQKNGSSAKPSCPYCCCAVGS---K----DRSLSVWL
WD 7 318-356 -RPLVVIHE--------LFDKSIMDISWTLN-----------------GLGILVCS---M----DGSVAFLD
WD 8 407-445 -RQQQQQLD--------QKSAATREMGSATS-----------------VAGVVNGE---S----LEDIRKNL
WD 9 449-486 -QVETRTAD--------GRRR-ITPLCIAQL-----------------DTGDFSTA---F----FNSIPLSG
WD10 530-568 -AGDSVNKD--------SMNATSTPAALSPS-----------------VLTTPSKI---E----PMKAFDSR
WD11 724-761 NREGKEWET--------VLTSRI--LTAAGS-----------------CDVVCVAC---E----KRMLSVFS
WD12 762-800 T-CGRRLLS--------PILLPSPISTLHCT-----------------GSYVMALT---A----AATLSVWD
WD13 810-849 EESLHSILA--------GSDMTVSQILLTQH-----------------GIPVMNLS---D----GKAYCFNP
WD40 Template TGECLRTLS--------GHTSGVTSVSFSPD-----------------GKRLVSGS---E----DGTIKVWD