Input parameters:
Query = ENSP00000263280 (Len=753)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000263280, Len=753):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MMEERAAAAVAAAASSCRPLGSGAGPGPTGAAPVSAPAPGPGPAGKGGGGGGSPGPTAGPEPLSLPGILHFIQHEWARFE 80
WD40-rpts
Query 81 AEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKMLEYALKQERAKYHKLKFGTDLNQGEKKADVSEQVSNGPVE 160
WD40-rpts
Query 161 SVTLENSPLVWKEGRQLLRQYLEEVGYTDTILDMRSKRVRSLLGRSLELNGAVEPSEGAPRAPPGPAGLSGGESLLVKQI 240
WD40-rpts
Query 241 EEQIKRNAAGKDGKERLGGSVLGQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFD 320
WD40-rpts
Query 321 FLGSGEDGEGAPDPRRCTVDGSPHELESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHEDVFIMDTIGGGEVSLG 400
WD40-rpts (_______________WD 1______________)(_________
Query 401 DLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALD 480
WD40-rpts ________WD 2________________)(________________WD 3_______________)
Query 481 VEPIHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLA 560
WD40-rpts (_________________WD 4________________) (_________________WD 5_____
Query 561 SCSADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTLESRGSSGPTQI 640
WD40-rpts ___________)(_____________________WD 6____________________) (_________________
Query 641 NQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAH 720
WD40-rpts __WD 7__________________) (_________________WD 8________________)(____________
Query 721 RKKHEEAIHAVACHPSKALIASAGADALAKVFV 753
WD40-rpts ________WD 9____________________)
9 WD40-repeats found in QUERY=ENSP00000263280 (Len=753):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 356-390 3.65 265.34 0.01642 15.0% 0.67
WD 2: Seg 2 391-429 6.43 380.45 0.00046 22.5% 32.43
WD 3: Seg 6 430-466 9.25 496.55 1.3e-05 35.0% 46.23
WD 4: Seg 9 481-519 7.91 441.38 7.0e-05 22.5% 47.02
WD 5: Seg 12 534-572 9.43 504.38 9.9e-06 40.0% 48.33
WD 6: Seg 16 573-619 5.82 354.87 0.00103 22.5% 48.07
WD 7: Seg 20 623-665 6.95 401.80 0.00024 25.0% 57.30
WD 8: Seg 24 669-707 9.77 518.12 6.5e-06 30.0% 54.87
WD 9: Seg 28 708-753 6.52 384.03 0.00042 20.0% 46.05
Multiple sequence alignment of 9 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 356-390 ---------------ILADLRDVDGL----PPKVTG-PPPGTPQPRP--HEDVFIMD
WD 2 391-429 T-------I------GGGEVSLGDLA----DLTVTN-DNDLSCDLSDSKDAFKKTWN
WD 3 430-466 ---------------PKFTLRSHYDG----IRSLAF-HHSQSALLTASEDGTLKLWN
WD 4 481-519 -V------E------PIHAFRAHRGP----VLAVAM-GSNSEYCYSGGADACIHSWK
WD 5 534-572 -S------V------LSHVLEGHGDA----VWGLAF-SPTSQRLASCSADGTVRIWD
WD 6 573-619 PS------SSSPACLCTFPTASEHGV----PTSVAFTSTEPAHIVASFRSGDTVLYD
WD 7 623-665 -G------S------ALLTLESRGSSGPTQINQVVS-HPNQPLTITAHDDRGIRFLD
WD 8 669-707 -G------K------PVHSMVAHLDA----VTCLAV-DPNGAFLMSGSHDCSLRLWS
WD 9 708-753 LDNKTCVQE------ITAHRKKHEEA----IHAVAC-HPSKALIASAGADALAKVFV
WD40 Template TG------E------CLRTLSGHTSG----VTSVSF-SPDGKRLVSGSEDGTIKVWD