Input parameters:
Query = ENSP00000263837 (Len=638)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000263837, Len=638):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MQVSSLNEVKIYSLSCGKSLPEWLSDRKKRALQKKDVDVRRRIELIQDFEMPTVCTTIKVSKDGQYILATGTYKPRVRCY 80
WD40-rpts (__________________WD 1_________________
Query 81 DTYQLSLKFERCLDSEVVTFEILSDDYSKIVFLHNDRYIEFHSQSGFYYKTRIPKFGRDFSYHYPSCDLYFVGASSEVYR 160
WD40-rpts )
Query 161 LNLEQGRYLNPLQTDAAENNVCDINSVHGLFATGTIEGRVECWDPRTRNRVGLLDCALNSVTADSEINSLPTISALKFNG 240
WD40-rpts (_________________WD 2________________)
Query 241 ALTMAVGTTTGQGKIFTSLEPEHDLNDVCLYPNSGMLLTANETPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVY 320
WD40-rpts
Query 321 DDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVN 400
WD40-rpts
Query 401 KELALKLIEEEEEKQKSTWKKKVKSLPNILTDDRFKVMFENPDFQVDEESEEFRLLNPLVSKISEKRKKKLRLLEQQELR 480
WD40-rpts
Query 481 EKEEEEEPEGKPSDAESSESSDDEKAWVEEVRKQRRLLQQEEKVKRQERLKEDQQTVLKPQFYEIKAGEEFRSFKDSATK 560
WD40-rpts
Query 561 QKLMNKTLEDRLKIEAKNGTLSVSDTTVGSKQLTFTLKRSEQQKKQQEAEKLHRQERKRLRRSAGHLKSRHKRGRSFH 638
WD40-rpts
2 WD40-repeats found in QUERY=ENSP00000263837 (Len=638):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 41-81 2.80 230.33 0.04789 17.5% 41.69
WD 2: Seg 12 166-204 3.96 278.10 0.01108 17.5% 31.23
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 41-81 RRIELIQDFEMPTVCTTIKVSKDGQYILATGTYKPRVRCYD
WD 2 166-204 -GRYLNPLQTDAAENNVCDINSVHGLF-ATGTIEGRVECWD
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRL-VSGSEDGTIKVWD