Input parameters:
Query = ENSP00000264515 (Len=538)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000264515, Len=538):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWSRDGHK 80
WD40-rpts (____________________WD 1____________________) (_________________WD 2___
Query 81 LVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNKVLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFD 160
WD40-rpts _____________) (_________________WD 3_________________) (_________________WD
Query 161 RRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE 240
WD40-rpts 4________________)(_____________________WD 5____________________)(_____________
Query 241 PMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSI 320
WD40-rpts ___________WD 6________________________) (_________________WD 7_______________
Query 321 WAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKSEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALL 400
WD40-rpts _)(______________WD 8______________) (_________________WD 9________________
Query 401 YLPIAPEVEDPEENPYGPPPDAVQTSLMDEGASSEKKRQSSADGSQPPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSK 480
WD40-rpts ) (_________________WD10________________)
Query 481 KKQAGRPKGSKGKEKDSPFKPKLYKGDRGLPLEGSAKGKVQAELSQPLTAGGAISELL 538
WD40-rpts
10 WD40-repeats found in QUERY=ENSP00000264515 (Len=538):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 7-52 7.21 412.44 0.00017 27.5% 46.12
WD 2: Seg 5 56-94 9.82 520.27 6.0e-06 35.0% 53.53
WD 3: Seg 9 98-137 5.84 355.86 0.00100 20.0% 51.20
WD 4: Seg 13 141-179 8.39 461.25 3.8e-05 17.5% 56.56
WD 5: Seg 17 180-226 8.28 456.64 4.4e-05 25.0% 47.42
WD 6: Seg 21 227-280 4.81 313.45 0.00371 25.0% 48.73
WD 7: Seg 25 284-322 6.36 377.50 0.00051 22.5% 54.03
WD 8: Seg 29 323-356 2.81 230.55 0.04758 15.0% 27.21
WD 9: Seg 32 363-401 3.79 271.21 0.01370 15.0% 19.87
WD10: Seg 35 405-443 4.61 305.16 0.00480 10.0% -24.45
Multiple sequence alignment of 10 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 7-52 ESFGQNYPE-------EAD-------------GTLDCISM-ALTCTFNRWG--TLL----AVGC-N-DGRIVIWD
WD 2 56-94 -R------G-------IAK-------------IISAHIHP-VCSLCWSRDG--HKL----VSAS-T-DNIVSQWD
WD 3 98-137 -G------D-------CDQ-------------RFRFP-SP-ILKVQYHPRDQNKVL----VCPM-K-SAPVMLTL
WD 4 141-179 -K------H-------VVL-------------PVDDDSDL-NVVASFDRRG--EYI----YTGN-A-KGKILVLK
WD 5 180-226 TD------SQDLVASFRVT-------------TGTSNTTA-IKSIEFARKG--SCF----LINT-A-DRIIRVYD
WD 6 227-280 GR------E-------ILTCGRDGEPEPMQKLQDLVNRTP-WKKCCFSGDG--EYI----VAGSAR-QHALYIWE
WD 7 284-322 -G------N-------LVK-------------ILHGTRGELLLDVAWHPVR--PII----ASIS---SGVVSIWA
WD 8 323-356 ------------------------------------QNQV-ENWSAFAPDF--KELDENVEYEE-R-ESEFDIED
WD 9 363-401 --------E-------QTG-------------ADAAEDEE-VDVTSVDPIA--AFC----SSDE-ELEDSKALLY
WD10 405-443 -A------P-------EVE-------------DPEENPYG-PPPDAVQTSL--MDE----GASS-E-KKRQSSAD
WD40 Template TG------E-------CLR-------------TLSGHTSG-VTSVSFSPDG--KRL----VSGS-E-DGTIKVWD