Input parameters:
Query = ENSP00000265565 (Len=1279)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000265565, Len=1279):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTLTERLREKISRAFYNHGLLCASYPIPIILFTGFCILACCYPLLKLPLPGTGPVEFTTPVKDYSPPPVDSDRKQGEPTE 80
WD40-rpts
Query 81 QPEWYVGAPVAYVQQIFVKSSVFPWHKNLLAVDVFRSPLSRAFQLVEEIRNHVLRDSSGIRSLEELCLQVTDLLPGLRKL 160
WD40-rpts
Query 161 RNLLPEHGCLLLSPGNFWQNDWERFHADPDIIGTIHQHEPKTLQTSATLKDLLFGVPGKYSGVSLYTRKRMVSYTITLVF 240
WD40-rpts
Query 241 QHYHAKFLGSLRARLMLLHPSPNCSLRAESLVHVHFKEEIGVAELIPLVTTYIILFAYIYFSTRKIDMVKSKWGLALAAV 320
WD40-rpts
Query 321 VTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATEL 400
WD40-rpts
Query 401 GIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPEACLPSAKPVGQPTRYERQLAV 480
WD40-rpts
Query 481 RPSTPHTITLQPSSFRNLRLPKRLRVVYFLARTRLAQRLIMAGTVVWIGILVYTDPAGLRNYLAAQVTEQSPLGEGALAP 560
WD40-rpts
Query 561 MPVPSGMLPPSHPDPAFSIFPPDAPKLPENQTSPGESPERGGPAEVVHDSPVPEVTWGPEDEELWRKLSFRHWPTLFSYY 640
WD40-rpts
Query 641 NITLAKRYISLLPVIPVTLRLNPREALEGRHPQDGRSAWPPPGPIPAGHWEAGPKGPGGVQAHGDVTLYKVAALGLATGI 720
WD40-rpts
Query 721 VLVLLLLCLYRVLCPRNYGQLGGGPGRRRRGELPCDDYGYAPPETEIVPLVLRGHLMDIECLASDGMLLVSCCLAGHVCV 800
WD40-rpts (____________WD 1__________
Query 801 WDAQTGDCLTRIPRPGRQRRDSGVGSGLEAQESWERLSDGGKAGPEEPGDSPPLRHRPRGPPPPSLFGDQPDLTCLIDTN 880
WD40-rpts _) (__
Query 881 FSAQPRSSQPTQPEPRHRAVCGRSRDSPGYDFSCLVQRVYQEEGLAAVCTPALRPPSPGPVLSQAPEDEGGSPEKGSPSL 960
WD40-rpts ____________WD 2______________) (_________________WD 3________________) (
Query 961 AWAPSAEGSIWSLELQGNLIVVGRSSGRLEVWDAIEGVLCCSSEEVSSGITALVFLDKRIVAARLNGSLDFFSLETHTAL 1040
WD40-rpts ______________WD 4______________) (________________WD 5_______________)
Query 1041 SPLQFRGTPGRGSSPASPVYSSSDTVACHLTHTVPCAHQKPITALKAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSG 1120
WD40-rpts (_______________WD 6______________) (___________
Query 1121 AITTVYIDQTMVLASGGQDGAICLWDVLTGSRVSHVFAHRGDVTSLTCTTSCVISSGLDDLISIWDRSTGIKFYSIQQDL 1200
WD40-rpts _____WD 7________________) (________________WD 8_______________) (__________
Query 1201 GCGASLGVISDNLLVTGGQGCVSFWDLNYGDLLQTVYLGKNSEAQPARQILVLDNAAIVCNFGSELSLVYVPSVLEKLD 1279
WD40-rpts ______WD 9_______________) (___________________WD10___________________)
10 WD40-repeats found in QUERY=ENSP00000265565 (Len=1279):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 14 774-802 4.73 310.05 0.00412 27.5% 38.16
WD 2: Seg 19 878-911 2.97 237.35 0.03870 7.5% 2.83
WD 3: Seg 20 915-953 3.85 273.57 0.01274 7.5% 16.11
WD 4: Seg 21 960-993 5.48 340.98 0.00158 22.5% 45.88
WD 5: Seg 24 997-1033 5.66 348.41 0.00125 22.5% 53.92
WD 6: Seg 30 1071-1105 5.58 345.29 0.00138 27.5% 35.59
WD 7: Seg 33 1109-1146 8.19 452.89 4.9e-05 40.0% 53.97
WD 8: Seg 37 1150-1186 6.81 396.01 0.00029 25.0% 51.54
WD 9: Seg 41 1190-1226 5.04 322.80 0.00278 17.5% 52.52
WD10: Seg 45 1230-1273 2.88 233.67 0.04329 17.5% 23.02
Multiple sequence alignment of 10 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 774-802 ---------GHLMDIEC-----L--ASDGMLLVSCCLAGHVCVWD
WD 2 878-911 ------DTNFSAQPRSS-----QPTQPEPRHRAVCGRSRDSPGYD
WD 3 915-953 -LVQRVYQEEGLAAVCT-----PALRPPSPGPVLSQAPEDEGGSP
WD 4 960-993 ----LAWAPSAEGSIWS-----LEL--QGNLIVVGRSSGRLEVWD
WD 5 997-1033 -GVLCCSSEEVSSGITA-----LVFL--DKRIVAARLNGSLDFFS
WD 6 1071-1105 T---HTVPCAHQKPITA-----L--KAAAGRLVTGSQDHTLRVFR
WD 7 1109-1146 -SCCLFTLQGHSGAITT-----VYID-QTMVLASGGQDGAICLWD
WD 8 1150-1186 -GSRVSHVFAHRGDVTS-----LTCTTS--CVISSGLDDLISIWD
WD 9 1190-1226 -GIKFYSIQQDLGCGAS-----LGVISDN--LLVTGGQGCVSFWD
WD10 1230-1273 -GDLLQTVYLGKNSEAQPARQILVLDNAAIVCNFGSELSLVYVPS
WD40 Template TGECLRTLSGHTSGVTS-----VSFSPDGKRLVSGSEDGTIKVWD