Input parameters:

  Query = ENSP00000273435 (Len=580)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000273435, Len=580):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVCIFSKDGTLFAWGNGENVTNKGLLHSFDLLKAVCLEFSP 80  
WD40-rpts                               (_________________WD 1________________)    (___________

Query       81 KNTVLATWQPYTTSKDGTAGIPNLQLYDVKTGTCLKSFIQKKMQNWCPSWSEDETLCARNVNNEVHFFENNNFNTIANKL 160 
WD40-rpts      ______WD 2_________________)   (________________WD 3________________)           

Query      161 HLQKINDFVLSPGPQPYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKKATAVLVIASTDVDK 240 
WD40-rpts                                                                                      

Query      241 TGASYYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKATIFNLKCDPVFDFGTGPRNAAYYSPH 320 
WD40-rpts                       (__________________WD 4_________________)(__________________WD 

Query      321 GHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDSTYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDVPSN 400 
WD40-rpts      5__________________)(_________________WD 6_________________)                    

Query      401 AELWQVSWQPFLDGIFPAKTITYQAVPSEVPNEEPKVATAYRPPALRNKPITNSKLHEEEPPQNMKPQSGNDKPLSKTAL 480 
WD40-rpts                                                                                      

Query      481 KNQRKHEAKKAAKQEARSDKSPDLAPTPAPQSTPRNTVSQSISGDPEIDKKIKNLKKKLKAIEQLKEQAATGKQLEKNQL 560 
WD40-rpts                                                                                      

Query      561 EKIQKETALLQELEDLELGI 580 
WD40-rpts                          

6 WD40-repeats found in QUERY=ENSP00000273435 (Len=580):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    26-64       2.86  232.97  0.04421       15.0%     37.19
  WD 2:  Seg  7    69-108      2.93  235.71  0.04068        7.5%     23.28
  WD 3:  Seg 10   112-149      3.48  258.43  0.02030       15.0%     49.39
  WD 4:  Seg 23   258-298      3.70  267.66  0.01528       12.5%     49.59
  WD 5:  Seg 27   299-340      4.07  282.93  0.00954       30.0%     42.04
  WD 6:  Seg 31   341-380      4.14  285.65  0.00877       15.0%     45.45

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   26-64     -TESTVFPRESGKNCKVCIFSKDGTLF--AW---GNGENVTNKGL
   WD 2   69-108    DLLKAVCLEFSPKNTVLATWQPYTTSK--DG---TAGIPNLQLYD
   WD 3  112-149    -GTCLKSFIQKKMQNWCPSWSEDETLC--AR---NV-NNEVHFFE
   WD 4  258-298    -GESAVVQLPKNGPIYDVVWNSSSTEFCAVY---GFMPAKATIFN
   WD 5  299-340    -LKCDPVFDFGTGPRNAAYYSPHGHIL--VLAGFGNLRGQMEVWD
   WD 6  341-380    VKNYKLISKPVASDSTYFAWCPDGEHI--LT---ATCAPRLRVNN

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRL--VS---GSEDGTIKVWD