Input parameters:

  Query = ENSP00000277540 (Len=452)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000277540, Len=452):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MMGCFALQTVDTELTADSVEWCPLQGCRHLLACGTYQLRRPEDRPAGPQNKGGMEVKEPQVRLGRLFLYSFNDNNSIHPL 80  
WD40-rpts                             (_____________________WD 1____________________)          

Query       81 VEVQRKDTSAILDMKWCHIPVAGHALLGLADASGSIQLLRLVESEKSHVLEPLSSLALEEQCLALSLDWSTGKTGRAGDQ 160 
WD40-rpts       (_________________WD 2________________)(__________________________WD 3_________

Query      161 PLKIISSDSTGQLHLLMVNETRPRLQKVASWQAHQFEAWIAAFNYWHPEIVYSGGDDGLLRGWDTRVPGKFLFTSKRHTM 240 
WD40-rpts      ________________)(_____________________WD 4____________________)    (___________

Query      241 GVCSIQSSPHREHILATGSYDEHILLWDTRNMKQPLADTPVQGGVWRIKWHPFHHHLLLAACMHSGFKILNCQKAMEERQ 320 
WD40-rpts      ______WD 5_________________)   (_________________WD 6_________________)         

Query      321 EATVLTSHTLPDSLVYGADWSWLLFRSLQRAPSWSFPSNLGTKTADLKGASELPTPCHECREDNDGEGHARPQSGMKPLT 400 
WD40-rpts                                                                                      

Query      401 EGMRKNGTWLQATAATTRDCGVNPEEADSAFSLLATCSFYDHALHLWEWEGN 452 
WD40-rpts                                                          

6 WD40-repeats found in QUERY=ENSP00000277540 (Len=452):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    24-70       4.40  296.43  0.00629        7.5%      9.61
  WD 2:  Seg  5    82-120      4.49  300.16  0.00560       10.0%     42.53
  WD 3:  Seg  9   121-177      3.98  278.97  0.01078       12.5%     42.44
  WD 4:  Seg 12   178-224      6.65  389.25  0.00035       22.5%     51.72
  WD 5:  Seg 16   229-268      7.90  441.14  7.1e-05       42.5%     52.96
  WD 6:  Seg 20   272-311      6.00  362.49  0.00081       12.5%     50.35

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   24-70     LQG---------CRHLLACGTYQLRRPEDRPAGPQNKG--------GMEV-KEPQVRLGRLFLYS
   WD 2   82-120    -EV---------Q-------RKDTSAILDMKWCHIPVA--------GHAL-LGLADASGSIQLLR
   WD 3  121-177    LVESEKSHVLEPL-------SSLALEEQCLALSLDWSTGKTGRAGDQPLK-IISSDSTGQLHLLM
   WD 4  178-224    VNE---TRPRLQK-------VASWQAHQFEAWIAAFNY-------WHPEI-VYSGGDDGLLRGWD
   WD 5  229-268    -GK---------F-------LFTSKRHTMGVCSIQSSP--------HREHILATGSYDEHILLWD
   WD 6  272-311    -MK---------Q-------PLADTPVQGGVWRIKWHP-------FHHHL-LLAACMHSGFKILN

   WD40 Template    TGE---------C-------LRTLSGHTSGVTSVSFSP--------DGKR-LVSGSEDGTIKVWD