Input parameters:

  Query = ENSP00000293879 (Len=1748)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000293879, Len=1748):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MARAWQHPFLNVFRHFRVDEWKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTGRYLYVLFRPLP 80  
WD40-rpts                                                                                      

Query       81 SKHFVIHLDVSSKDNQVIRVSFSNLFKEFKSTATWLQFPLVLEARTPQRDLVGLAPSGARWTCLQLDLQDVLLVYLNRCY 160 
WD40-rpts                                                                                      

Query      161 GHLKSIRLCASLLVRNLYTSDLCFEPAISGAQWAKLPVTPMPREMAFPVPKGESWHDRYIHVRFPSESLKVPSKPIEKSC 240 
WD40-rpts                                                                                      

Query      241 SPPEAVLLGPGPQPLPCPVASSKPVRFSVSPVVQTPSPTASGRAALAPRPFPEVSLSQERSDASNADGPGFHSLEPWAQL 320 
WD40-rpts                                                                                      

Query      321 EASDIHTAAAGTHVLTHESAEVPVARTGSCEGFLPDPVLRLKGVIGFGGHGTRQALWTPDGAAVVYPCHAVIVVLLVDTG 400 
WD40-rpts                                (_______________________WD 1______________________)(__

Query      401 EQRFFLGHTDKVSALALDGSSSLLASAQARAPSVMRLWDFQTGRCLCLFRSPMHVVCSLSFSDSGALLCGVGKDHHGRTM 480 
WD40-rpts      ________________WD 2__________________)   (_________________WD 3________________

Query      481 VVAWGTGQVGLGGEVVVLAKAHTDFDVQAFRVTFFDETRMASCGQGSVRLWRLRGGVLRSCPVDLGEHHALQFTDLAFKQ 560 
WD40-rpts      )           (_________________WD 4_________________)          (_________________

Query      561 ARDGCPEPSAAMLFVCSRSGHILEIDCQRMVVRHARRLLPTRTPGGPHPQKQTFSSGPGIAISSLSVSPAMCAVGSEDGF 640 
WD40-rpts      __WD 5___________________)                      (________________WD 6___________

Query      641 LRLWPLDFSSVLLEAEHEGPVSSVCVSPDGLRVLSATSSGHLGFLDTLSRVYHMLARSHTAPVLALAMEQRRGQLATVSQ 720 
WD40-rpts      ____)  (_________________WD 7________________)   (_________________WD 8_________

Query      721 DRTVRIWDLATLQQLYDFTSSEDAPCAVTFHPTRPTFFCGFSSGAVRSFSLEAAEVLVEHTCHRGAVTGLTATPDGRLLF 800 
WD40-rpts      _______)   (_________________WD 9________________)   (_________________WD10_____

Query      801 SSCSQGSLAQYSCADPQWHVLRVAADMVCPDAPASPSALAVSRDGRLLAFVGPSRCTVTVMGSASLDELLRVDIGTLDLA 880 
WD40-rpts      ___________)           (_________________WD11________________)          (_______

Query      881 SSRLDSAMAVCFGPAALGHLLVSTSSNRVVVLDAVSGRIIRELPGVHPEPCPSLTLSEDARFLLIAAGRTIKVWDYATQA 960 
WD40-rpts      ___________WD12__________________)   (________________WD13________________)     

Query      961 SPGPQVYIGHSEPVQAVAFSPDQQQVLSAGDAVFLWDVLAPTESDQSFPGAPPACKTGPGAGPLEDAASRASELPRQQVP 1040
WD40-rpts      (________________WD14_______________)(_______________WD15_______________)       

Query     1041 KPCQASPPRLGVCARPPEGGDGARDTRNSGAPRTTYLASCKAFTPARVSCSPHSAKGTCPPPASGGWLRLKAVVGYSGNG 1120
WD40-rpts                              (_________________WD16________________)                 

Query     1121 RANMVWRPDTGFFAYTCGRLVVVEDLHSGAQQHWSGHSAEISTLALSHSAQVLASASGRSSTTAHCQIRVWDVSGGLCQH 1200
WD40-rpts                                 (____________________WD17___________________)   (____

Query     1201 LIFPHSTTVLALAFSPDDRLLVTLGDHDGRTLALWGTATYDLVSSTRLPEPVHGVAFNPWDAGELTCVGQGTVTFWLLQQ 1280
WD40-rpts      ______________WD18_________________)(__________________WD19_________________)   

Query     1281 RGADISLQVRREPVPEAVGAGELTSLCYGAPPLLYCGTSSGQVCVWDTRAGRCFLSWEADDGGIGLLLFSGSRLVSGSST 1360
WD40-rpts             (_________________WD20_________________)   (________________WD21_________

Query     1361 GRLRLWAVGAVSELRCKGSGASSVFMEHELVLDGAVVSASFDDSVDMGVVGTTAGTLWFVSWAEGTSTRLISGHRSKVNE 1440
WD40-rpts      ______)         (____________________WD22___________________)   (_______________

Query     1441 VVFSPGESHCATCSEDGSVRVWALASMELVIQFQVLNQSCLCLAWSPPCCGRPEQQRLAAGYGDGSLRIFSVSRTAMELK 1520
WD40-rpts      __WD23________________)   (____________________WD24___________________)   (_____

Query     1521 MHPHPVALTTVAFSTDGQTVLSGDKDGLVAVSHPCTGTTFRVLSDHQGAPISTICVTCKECEDLGVEGTDLWLAASGDQR 1600
WD40-rpts      ____________WD25________________)   (______________________WD26_________________

Query     1601 VSVWASDWLRNHCELVDWLSFPMPATTETQGHLPPSLAAFCPWDGALLMYVGPGVYKEVIIYNLCQKQVVEKIPLPFFAM 1680
WD40-rpts      ____)                 (__________________WD27_________________)  (______________

Query     1681 SLSLSPGTHLLAVGFAECMLRLVDCAMGTAQDFAGHDNAVHLCRFTPSARLLFTAARNEILVWEVPGL 1748
WD40-rpts      ___WD28________________)(_________________WD29_________________)    

29 WD40-repeats found in QUERY=ENSP00000293879 (Len=1748):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 16   347-397      4.19  287.55  0.00827       22.5%     35.86
  WD 2:  Seg 20   398-439      7.47  423.23  0.00012       22.5%     55.37
  WD 3:  Seg 24   443-481      7.56  427.03  0.00011       27.5%     58.02
  WD 4:  Seg 29   493-532      5.81  354.73  0.00103       17.5%     52.55
  WD 5:  Seg 34   543-586      4.49  300.24  0.00559       22.5%     42.14
  WD 6:  Seg 38   609-645      5.31  334.10  0.00196       30.0%     49.10
  WD 7:  Seg 42   648-686      7.67  431.39  9.5e-05       30.0%     56.85
  WD 8:  Seg 46   690-728      8.26  455.86  4.5e-05       22.5%     58.02
  WD 9:  Seg 50   732-770      7.13  409.19  0.00019       15.0%     56.41
  WD10:  Seg 54   774-812      8.14  451.03  5.2e-05       27.5%     58.40
  WD11:  Seg 59   824-862      5.37  336.32  0.00183       17.5%     34.61
  WD12:  Seg 63   873-914      6.53  384.41  0.00041       25.0%     41.83
  WD13:  Seg 66   918-955      5.97  361.39  0.00084       27.5%     45.47
  WD14:  Seg 70   961-997      5.70  349.95  0.00120       27.5%     40.53
  WD15:  Seg 74   998-1033     3.43  256.36  0.02164       10.0%      8.46
  WD16:  Seg 78  1065-1103     4.17  286.99  0.00842       15.0%     -4.02
  WD17:  Seg 84  1148-1192     6.73  392.76  0.00032       27.5%     54.61
  WD18:  Seg 88  1196-1236     7.52  425.22  0.00012       30.0%     57.00
  WD19:  Seg 92  1237-1277     6.47  382.08  0.00044       22.5%     57.11
  WD20:  Seg 97  1288-1327     4.67  307.43  0.00447       20.0%     44.67
  WD21:  Seg100  1331-1367     7.05  405.77  0.00021       35.0%     54.63
  WD22:  Seg105  1377-1421     4.45  298.54  0.00589       22.5%     37.27
  WD23:  Seg109  1425-1463     9.35  500.82  1.1e-05       42.5%     57.38
  WD24:  Seg113  1467-1511     6.10  366.52  0.00072       20.0%     57.99
  WD25:  Seg117  1515-1553     8.26  456.00  4.4e-05       30.0%     57.05
  WD26:  Seg121  1557-1605     4.91  317.62  0.00326       30.0%     47.84
  WD27:  Seg126  1623-1663     3.96  278.23  0.01103       15.0%     41.29
  WD28:  Seg130  1666-1704     5.85  356.19  0.00099       17.5%     56.00
  WD29:  Seg134  1705-1744     6.17  369.35  0.00066       22.5%     52.84

Multiple sequence alignment of 29 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  347-397    TGS-CEGF-LP-----DPVLRLKGVIGFGGH-GTRQA---------LW--------T------PD--GAAV--V-YPC--H--AVI------VVLLV
   WD 2  398-439    DTG-EQRF-FL-----GHT-----------D-KVSAL---------AL--------D------GS--SSLL--A-SAQ--ARAPSV------MRLWD
   WD 3  443-481    -GR-CLCL-FR-----SPM-----------H-VVCSL---------SF--------S------DS--GALL--C-GVG--K--DHH------GRTMV
   WD 4  493-532    -GE-VVVL-AK-----AHT-----------DFDVQAF---------RV--------T------FF--DETR--M-ASC--G--QGS------VRLWR
   WD 5  543-586    -----VDL-GE-----HHA-----------L-QFTDL---------AFKQARDGCPE------PS--AAML--F-VCS--R--SGH------ILEID
   WD 6  609-645    -PQ-KQTF-SS-----GPG-----------I-AISSL---------SV--------S------PA----MC--A-VGS--E--DGF------LRLWP
   WD 7  648-686    -FS-SVLL-EA-----EHE-----------G-PVSSV---------CV--------S------PD--GLRV--L-SAT--S--SGH------LGFLD
   WD 8  690-728    -RV-YHML-AR-----SHT-----------A-PVLAL---------AM--------E------QR--RGQL--A-TVS--Q--DRT------VRIWD
   WD 9  732-770    -LQ-QLYD-FT-----SSE-----------D-APCAV---------TF--------H------PT--RPTF--F-CGF--S--SGA------VRSFS
   WD10  774-812    -AE-VLVE-HT-----CHR-----------G-AVTGL---------TA--------T------PD--GRLL--F-SSC--S--QGS------LAQYS
   WD11  824-862    --A-ADMV-CP-----DAP-----------A-SPSAL---------AV--------S------RD--GRLL--AFVGP--S--RCT------VTVMG
   WD12  873-914    DIG-TLDL-AS-----SRL-----------D-SAMAV---------CF--------G------PAALGHLL--V-STS--S--NRV------VVLDA
   WD13  918-955    -RI-IREL-PG-----VHP-----------E-PCPSL---------TL--------S------ED--ARFL--L-IAA-----GRT------IKVWD
   WD14  961-997    -SP-GPQV-YI-----GHS-----------E-PVQAV---------AF--------S------PD--QQQV--L-SAG--D----A------VFLWD
   WD15  998-1033   VLA-PTES-DQ-----SFP-----------G-APPAC---------KT--------G------PG--AGPL---------E--DAA------SRASE
   WD16 1065-1103   -DT-RNSG-AP-----RTT-----------Y-LASCK---------AF--------T------PA--RVSC--S-PHS--A--KGT------CPPPA
   WD17 1148-1192   -SG-AQQH-WS-----GHS-----------A-EISTL---------AL--------S------HS--AQVL--A-SAS--G--RSSTTAHCQIRVWD
   WD18 1196-1236   -GL-CQHL-IF-----PHS-----------T-TVLAL---------AF--------S------PD--DRLL--V-TLGDHD--GRT------LALWG
   WD19 1237-1277   TATYDLVS-ST-----RLP-----------E-PVHGV---------AF--------N------PW--DAGE--L-TCV--G--QGT------VTFWL
   WD20 1288-1327   QVR-REPVPEA-----VGA-----------G-ELTSL---------CY--------G------AP--P-LL--Y-CGT--S--SGQ------VCVWD
   WD21 1331-1367   -GR-CFLS-WE-----ADD-----------G-GIGLL---------LF--------S----------GSRL--V-SGS--S--TGR------LRLWA
   WD22 1377-1421   KGS-GASS-VFMEHELVLD-----------G-AVVSA---------SF--------D------DS--VDMG--V-VGT--T--AGT------LWFVS
   WD23 1425-1463   -GT-STRL-IS-----GHR-----------S-KVNEV---------VF--------S------PG--ESHC--A-TCS--E--DGS------VRVWA
   WD24 1467-1511   -ME-LVIQ-FQ-----VLN-----------Q-SCLCL---------AW--------SPPCCGRPE--QQRL--A-AGY--G--DGS------LRIFS
   WD25 1515-1553   -TA-MELK-MH-----PHP-----------V-ALTTV---------AF--------S------TD--GQTV--L-SGD--K--DGL------VAVSH
   WD26 1557-1605   -GT-TFRV-LS-----DHQ-----------G-APISTICVTCKECEDL--------G------VE--GTDL-WL-AAS--G--DQR------VSVWA
   WD27 1623-1663   -MP-ATTE-TQ-----GHL-----------P-PSLAA---------FC--------P------WD--GALLMYV-GPG--V--YKE------VIIYN
   WD28 1666-1704   -QK-QVVE-KI-----PLP-----------F-FAMSL---------SL--------S------PG--THLL--A-VGF--A--ECM------LRLVD
   WD29 1705-1744   CAMGTAQD-FA-----GHD-----------N-AVHLC---------RF--------T------PS--ARLL--F-TAA--R--N-E------ILVWE

   WD40 Template    TGE-CLRT-LS-----GHT-----------S-GVTSV---------SF--------S------PD--GKRL--V-SGS--E--DGT------IKVWD