Input parameters:
Query = ENSP00000293883 (Len=790)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000293883, Len=790):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MEKMSRVTTALGGSVLTGRTMHCHLDAPANAISVCRDAAQVVVAGRSIFKIYAIEEEQFVEKLNLRVGRKPSLNLSCADV 80
WD40-rpts (_________________WD 1________________) (_____________________WD
Query 81 VWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLSGSQDGFMKCFDLRRKDSVSTFS 160
WD40-rpts 2____________________) (_________________WD 3_________________) (_______
Query 161 GQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTH 240
WD40-rpts __________WD 4_________________) (_________________WD 5_________________)(___
Query 241 RAKEMHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWDVRRPFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGSKD 320
WD40-rpts _________________WD 6____________________) (________________WD 7_________
Query 321 SSLCQHLFRDASQPVERANPEGLCYGLFGDLAFAAKESLVAAESGRKPYTGDRRHPIFFKRKLDPAEPFAGLASSALSVF 400
WD40-rpts ______) (_________________WD 8_________________) (_________________W
Query 401 ETEPGGGGMRWFVDTAERYALAGRPLAELCDHNAKVARELGRNQVAQTWTMLRIIYCSPGLVPTANLNHSVGKGGSCGLP 480
WD40-rpts D 9________________)
Query 481 LMNSFNLKDMAPGLGSETRLDRSKGDARSDTVLLDSSATLITNEDNEETEGSDVPADYLLGDVEGEEDELYLLDPEHAHP 560
WD40-rpts
Query 561 EDPECVLPQEAFPLRHEIVDTPPGPEHLQDKADSPHVSGSEADVASLAPVDSSFSLLSVSHALYDSRLPPDFFGVLVRDM 640
WD40-rpts
Query 641 LHFYAEQGDVQMAVSVLIVLGERVRKDIDEQTQEHWYTSYIDLLQRFRLWNVSNEVVKLSTSRAVSCLNQASTTLHVNCS 720
WD40-rpts
Query 721 HCKRPMSSRGWVCDRCHRCASMCAVCHHVVKGLFVWCQGCSHGGHLQHIMKWLEGSSHCPAGCGHLCEYS 790
WD40-rpts
9 WD40-repeats found in QUERY=ENSP00000293883 (Len=790):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 15-53 3.61 263.75 0.01724 17.5% 47.24
WD 2: Seg 5 57-103 5.66 348.26 0.00126 17.5% 37.98
WD 3: Seg 8 110-149 7.30 416.03 0.00015 32.5% 47.91
WD 4: Seg 12 153-192 7.81 437.07 8.0e-05 32.5% 50.97
WD 5: Seg 15 197-236 7.42 421.19 0.00013 30.0% 48.73
WD 6: Seg 19 237-282 5.52 342.66 0.00150 22.5% 47.14
WD 7: Seg 23 291-327 5.75 352.18 0.00112 20.0% 47.76
WD 8: Seg 26 334-373 3.91 276.02 0.01181 10.0% 17.75
WD 9: Seg 29 382-420 5.00 321.39 0.00290 15.0% -5.15
Multiple sequence alignment of 9 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 15-53 -VL---TGRTMHCHLDAPANAISV--C--------R-DAA-QV---VVAG-RSIFKIYA
WD 2 57-103 -EQ---FVEKLNLRVGR-KPSLNL--SCADVVWHQM-DEN-LL---ATAATNGVVVTWN
WD 3 110-149 -NK---QDQLFTEHKRT-VNKVCF--H--------PTEAH-VL---LSGSQDGFMKCFD
WD 4 153-192 -KD---SVSTFSGQSES-VRDVQF--S--------IRDYF-TF---ASTFENGNVQLWD
WD 5 197-236 -DR---CERMFTAHNGP-VFCCDW--H--------P-EDRGWL---ATGGRDKMVKVWD
WD 6 237-282 MTTHRAKEMHCVQTIAS-VARVKW--R--------P-ECR-HHLATCSMMVDHNIYVWD
WD 7 291-327 --------AMFEEHRDV-TTGIAWRHP--------H-DPS-FL---LSGSKDSSLCQHL
WD 8 334-373 -PV---ERANPEGLCYGLFGDLAF--A--------A-KES-LV---AAESGRKPYTGDR
WD 9 382-420 KLD---PAEPFAGLASS-ALSV-F--E--------T-EPG-GG---GMRWFVDTAERYA
WD40 Template TGE---CLRTLSGHTSG-VTSVSF--S--------P-DGK-RL---VSGSEDGTIKVWD