Input parameters:

  Query = ENSP00000296266 (Len=1292)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000296266, Len=1292):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRAVLTWRDKAEHCINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIW 80  
WD40-rpts      (_________________WD 1________________)   (_________________WD 2________________

Query       81 TSKLEGILKYTSWSVMSSLHLHLPFLGLHKTVRVTATDKAPKGQGGRIDCLRPSVQNQPGQKHNDAIQCVSYNPITHQLA 160 
WD40-rpts      )(___________________WD 3___________________)        (________________WD 4______

Query      161 SCSSSDFGLWSPEQKSVSKHKSSSKIICCSWTNDGQYLALGMFNGIISIRNKNGEEKVKIERPGGSLSPIWSICWNPSSR 240 
WD40-rpts      __________)(_________________WD 5_________________)(___________________WD 6_____

Query      241 WESFWMNRENEDAEDVIVNRYIQEIPSTLKSAVYSSQGSEAEEEEPEEEDDSPRDDNLEERNDILAVADWGQKVSFYQLS 320 
WD40-rpts      ______________)                    (___________________WD 7__________________)  

Query      321 GKQIGKDRALNFDPCCISYFTKGEYILLGGSDKQVSLFTKDGVRLGTVGEQNSWVWTCQAKPDSNYVVVGCQDGTISFYQ 400 
WD40-rpts      (_________________WD 8________________)  (_________________WD 9________________)

Query      401 LIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCKELVKKIAIYRNRLAIQLPEKILIYELYSEDLSDMHYRVKEK 480 
WD40-rpts                                                                                      

Query      481 IIKKFECNLLVVCANHIILCQEKRLQCLSFSGVKEREWQMESLIRYIKVIGGPPGREGLLVGLKNGQILKIFVDNLFAIV 560 
WD40-rpts                                    (__________________WD10__________________) (______

Query      561 LLKQATAVRCLDMSASRKKLAVVDENDTCLVYDIDTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASTFPVHRQK 640 
WD40-rpts      ___________WD11_________________)                                               

Query      641 LQGFVVGYNGSKIFCLHVFSISAVEVPQSAPMYQYLDRKLFKEAYQIACLGVTDTDWRELAMEALEGLDFETAKKAFIRV 720 
WD40-rpts                                                                                      

Query      721 QDLRYLELISSIEERKKRGETNNDLFLADVFSYQGKFHEAAKLYKRSGHENLALEMYTDLCMFEYAKDFLGSGDPKETKM 800 
WD40-rpts                                                                                      

Query      801 LITKQADWARNIKEPKAAVEMYISAGEHVKAIEICGDHGWVDMLIDIARKLDKAEREPLLLCATYLKKLDSPGYAAETYL 880 
WD40-rpts                                                                                      

Query      881 KMGDLKSLVQLHVETQRWDEAFALGEKHPEFKDDIYMPYAQWLAENDRFEEAQKAFHKAGRQREAVQVLEQLTNNAVAES 960 
WD40-rpts                                                                                      

Query      961 RFNDAAYYYWMLSMQCLDIAQDPAQKDTMLGKFYHFQRLAELYHGYHAIHRHTEDPFSVHRPETLFNISRFLLHSLPKDT 1040
WD40-rpts                                                                                      

Query     1041 PSGISKVKILFTLAKQSKALGAYRLARHAYDKLRGLYIPARFQKSIELGTLTIRAKPFHDSEELVPLCYRCSTNNPLLNN 1120
WD40-rpts                                                                                      

Query     1121 LGNVCINCRQPFIFSASSYDVLHLVEFYLEEGITDEEAISLIDLEVLRPKRDDRQLEIANNSSQILRLVETKDSIGDEDP 1200
WD40-rpts                                                                                      

Query     1201 FTAKLSFEQGGSEFVPVVVSRLVLRSMSRRDVLIKRWPPPLRWQYFRSLLPDASITMCPSCFQMFHSEDYELLVLQHGCC 1280
WD40-rpts                                                                                      

Query     1281 PYCRRCKDDPGP 1292
WD40-rpts                  

11 WD40-repeats found in QUERY=ENSP00000296266 (Len=1292):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-39       6.67  390.18  0.00034       20.0%     51.56
  WD 2:  Seg  5    43-81       9.85  521.37  5.8e-06       40.0%     52.97
  WD 3:  Seg  9    82-125      4.21  288.45  0.00804       15.0%     36.58
  WD 4:  Seg 12   134-171      4.96  319.75  0.00305       20.0%     46.38
  WD 5:  Seg 15   172-211      7.26  414.53  0.00016       20.0%     55.63
  WD 6:  Seg 19   212-255      4.87  315.81  0.00345       12.5%     49.06
  WD 7:  Seg 25   276-318      3.42  256.09  0.02182        2.5%     39.03
  WD 8:  Seg 28   321-359      5.48  341.10  0.00157       12.5%     54.56
  WD 9:  Seg 32   362-400      7.08  407.12  0.00020       32.5%     56.47
  WD10:  Seg 47   511-552      3.77  270.59  0.01397       17.5%     50.74
  WD11:  Seg 51   554-593      6.06  365.07  0.00075       22.5%     55.23

Multiple sequence alignment of 11 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-39     MR----A----V---LT--WRDKAEHCINDIAFKPDGTQLILAAGS-RLLVYD
   WD 2   43-81     -G----T----L---LQ--PLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWT
   WD 3   82-125    SK----LEGILK---YT--SWSVMSSLHLHLPFLGLHKTVRVTATDKAPKGQG
   WD 4  134-171    -S----V----Q---NQ--PGQKHNDAIQCVSYNPITHQLASCS-SSDFGLWS
   WD 5  172-211    PE----Q----K---SV--SKHKSSSKIICCSWTNDGQYLALGMFNGIISIRN
   WD 6  212-255    KNGEEKV----K---IE--RPGGSLSPIWSICWNPSSRWESFWMNRENEDAED
   WD 7  276-318    SQ----G----SEAEEE--EPEEEDDSPRDDNLEERNDILAVADWGQKVSFYQ
   WD 8  321-359    -G----K----Q---IG--KDRALNFDPCCISYFTKGEYILLGGSDKQVSLFT
   WD 9  362-400    -G----V----R---LG--TVGEQNSWVWTCQAKPDSNYVVVGCQDGTISFYQ
   WD10  511-552    SG----V----K---EREWQMESLIRYIKVIGGPPGREGLLVGLKNGQILKIF
   WD11  554-593    DN----L----F---AI--VLLKQATAVRCLDMSASRKKLAVVDENDTCLVYD

   WD40 Template    TG----E----C---LR--TLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD