Input parameters:

  Query = ENSP00000296394 (Len=698)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000296394, Len=698):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSAVVAQTLHVFGLRSHVANNIFYFDEQIIIFPSGNHCVKYNVDQKWQKFIPGSEKSQGMLALSISPNRRYLAISETVQE 80  
WD40-rpts      (___________________WD 1__________________)(____________________WD 2____________

Query       81 KPAITIYELSSIPCRKRKVLNNFDFQVQKFISMAFSPDSKYLLAQTSPPESNLVYWLWEKQKVMAIVRIDTQNNPVYQVS 160 
WD40-rpts      _______)        (___________________WD 3__________________)   (_________________

Query      161 FSPQDNTQVCVTGNGMFKLLRFAEGTLKQTSFQRGEPQNYLAHTWVADDKIVVGTDTGKLFLFESGDQRWETSIMVKEPT 240 
WD40-rpts      WD 4________________)(___________________WD 5__________________)(_______________

Query      241 NGSKSLDVIQESESLIEFPPVSSPLPSYEQMVAASSHSQMSMPQVFAIAAYSKGFACSAGPGRVLLFEKMEEKDFYRESR 320 
WD40-rpts      ____WD 6___________________)   (________________WD 7_______________)            

Query      321 EIRIPVDPQSNDPSQSDKQDVLCLCFSPSEETLVASTSKNQLYSITMSLTEISKGEPAHFEYLMYPLHSAPITGLATCIR 400 
WD40-rpts             (___________________WD 8___________________)(____________________WD 9____

Query      401 KPLIATCSLDRSIRLWNYETNTLELFKEYQEEAYSISLHPSGHFIVVGFADKLRLMNLLIDDIRSFKEYSVRGCGECSFS 480 
WD40-rpts      ________________)  (________________WD10________________)   (________________WD1

Query      481 NGGHLFAAVNGNVIHVYTTTSLENISSLKGHTGKIRSIVWNADDSKLISGGTDGAVYEWNLSTGKRETECVLKSCSYNCV 560 
WD40-rpts      1________________)   (_________________WD12________________)   (________________

Query      561 TVSPDAKIIFAVGSDHTLKEIADSLILREISAFDVTYTAIVISHSGRMMFVGTSVGTIRAMKYPLPLQKEFNEYQAHAGP 640 
WD40-rpts      _WD13________________)(_________________WD14_________________)     (____________

Query      641 ITKVSRALSPGTQSHTCLLRALFIPSTSQCLFSLLLLSYLFIHHSLNHHLLTMNILFV 698 
WD40-rpts      __WD15______________)                                     

15 WD40-repeats found in QUERY=ENSP00000296394 (Len=698):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-43       4.72  309.51  0.00419       17.5%     45.79
  WD 2:  Seg  5    44-88       6.29  374.31  0.00056       20.0%     50.32
  WD 3:  Seg  9    97-139      6.36  377.32  0.00051       22.5%     50.32
  WD 4:  Seg 13   143-181      8.12  450.26  5.3e-05       22.5%     59.22
  WD 5:  Seg 17   182-224      4.98  320.55  0.00298       15.0%     51.67
  WD 6:  Seg 21   225-268      5.48  341.11  0.00157       15.0%     35.78
  WD 7:  Seg 24   272-308      4.45  298.53  0.00589       10.0%     41.28
  WD 8:  Seg 29   328-371      6.70  391.55  0.00033       17.5%     41.63
  WD 9:  Seg 32   372-417      7.52  425.18  0.00012       15.0%     48.51
  WD10:  Seg 35   420-457      6.59  386.80  0.00038       20.0%     52.36
  WD11:  Seg 39   461-498      5.91  358.87  0.00091       17.5%     51.36
  WD12:  Seg 43   502-540      9.89  523.03  5.5e-06       32.5%     54.30
  WD13:  Seg 47   544-582      7.56  427.08  0.00011       22.5%     53.02
  WD14:  Seg 51   583-622      9.94  525.14  5.2e-06       25.0%     56.95
  WD15:  Seg 55   628-661      4.97  320.00  0.00303       17.5%     38.87

Multiple sequence alignment of 15 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-43     MS----A------VVAQTLHVFGLRSHVANNIFYFDEQIII---FPSGNH-----CVKYNV
   WD 2   44-88     DQ--KWQ------KFIP---GSEKSQGMLALSISPNRRYLAISETVQEKP-----AITIYE
   WD 3   97-139    -R----K------VLNN---FDFQVQKFISMAFSPDSKYLL---AQTSPP-ESNLVYWLWE
   WD 4  143-181    -V----M------AIVR---IDTQNNPVYQVSFSPQDNTQV---CVTGNG-----MFKLLR
   WD 5  182-224    FA----E--GTLKQTSF---QRGEPQNYLAHTWVADDKIVV---GTD-TG-----KLFLFE
   WD 6  225-268    SGDQRWE------TSIM---VKEPTNGSKSLDVIQESESLI---EFPPVS-----SPLPSY
   WD 7  272-308    -V----A------ASSH---SQMSMPQVFAIAAYSKGFACS---AG--PG-----RVLLFE
   WD 8  328-371    -P----Q------SNDP---SQSDKQDVLCLCFSPSEETLV---ASTSKNQLYSITMSLTE
   WD 9  372-417    IS----KGEPAHFEYLM---YPLHSAPITGLATCIRKPLIA---TCSLDR-----SIRLWN
   WD10  420-457    -T----N------TLEL---FKEYQEEAYSISLHPSGHFIV---VGFAD------KLRLMN
   WD11  461-498    -D----D------IRSF---KEYSVRGCGECSFSNGGHLFA---AVN-GN-----VIHVYT
   WD12  502-540    -L----E------NISS---LKGHTGKIRSIVWNADDSKLI---SGGTDG-----AVYEWN
   WD13  544-582    -G----K------RETE---CVLKSCSYNCVTVSPDAKIIF---AVGSDH-----TLKEIA
   WD14  583-622    DS----L------ILRE---ISAFDVTYTAIVISHSGRMMF---VGTSVG-----TIRAMK
   WD15  628-661    -Q----K------EFNE---YQAHAGPITKVSRA-----LS---PGTQSH-----TCLLRA

   WD40 Template    TG----E------CLRT---LSGHTSGVTSVSFSPDGKRLV---SGSEDG-----TIKVWD