Input parameters:

  Query = ENSP00000308312 (Len=605)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000308312, Len=605):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEIVYVYVKKRSEFGKQCNFSDRQAELNIDIMPNPELAEQFVERNPVDTGIQCSISMSEHEANSERFEMETRGVNHVEGG 80  
WD40-rpts                                                                                      

Query       81 WPKDVNPLELEQTIRFRKKVEKDENYVNAIMQLGSIMEHCIKQNNAIDIYEEYFNDEEAMEVMEEDPSAKTINVFRDPQE 160 
WD40-rpts                                                                                      

Query      161 IKRAATHLSWHPDGNRKLAVAYSCLDFQRAPVGMSSDSYIWDLENPNKPELALKPSSPLVTLEFNPKDSHVLLGGCYNGQ 240 
WD40-rpts                                                   (_________________WD 1_____________

Query      241 IACWDTRKGSLVAELSTIESSHRDPVYGTIWLQSKTGTECFSASTDGQVMWWDIRKMSEPTEVVILDITKKEQLENALGA 320 
WD40-rpts      ____)       (__________________WD 2_________________)             (_____________

Query      321 ISLEFESTLPTKFMVGTEQGIVISCNRKAKTSAEKIVCTFPGHHGPIYALQRNPFYPKNFLTVGDWTARIWSEDSRESSI 400 
WD40-rpts      ____WD 3_________________)       (_________________WD 4________________)(_______

Query      401 MWTKYHMAYLTDAAWSPVRPTVFFTTRMDGTLDIWDFMFEQCDPTLSLKVCDEALFCLRVQDNGCLIACGSQLGTTTLLE 480 
WD40-rpts      ____________WD 5___________________)     (_________________WD 6________________)

Query      481 VSPGLSTLQRNEKNVASSMFERETRREKILEARHREMRLKEKGKAEGRDEEQTDEELAVDLEALVSKAEEEFFDIIFAEL 560 
WD40-rpts                                                                                      

Query      561 KKKEADAIKLTPVPQQPSPEEDQVVEEGEEAAGEEGDEEVEEDLA 605 
WD40-rpts                                                   

6 WD40-repeats found in QUERY=ENSP00000308312 (Len=605):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 10   206-245      4.79  312.51  0.00382       25.0%     49.52
  WD 2:  Seg 14   253-293      5.43  338.96  0.00168       30.0%     47.97
  WD 3:  Seg 19   307-346      3.74  269.20  0.01458       12.5%     42.07
  WD 4:  Seg 21   354-392      5.30  333.78  0.00198       17.5%     40.96
  WD 5:  Seg 25   393-436      4.73  310.19  0.00410       22.5%     51.75
  WD 6:  Seg 29   442-480      4.58  303.79  0.00500       15.0%     54.00

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  206-245    -P---NKPELALKPSSPLVTLEF--NPKDSHVL-LGGCYNGQIACWD
   WD 2  253-293    -A---ELSTIESSHRDPVYGTIWLQSK-TGTEC-FSASTDGQVMWWD
   WD 3  307-346    DI---TKKEQLENALGAISLEFE--ST-LPTKF-MVGTEQGIVISCN
   WD 4  354-392    -E---KIVCTFPGHHGPIYALQR--NP-FYPKN-FLTVGDWTARIWS
   WD 5  393-436    EDSRESSIMWTKYHMAYLTDAAW--SP-VRPTVFFTTRMDGTLDIWD
   WD 6  442-480    -C---DPTLSLKVCDEALFCLRV--QD-NGCLI-ACGSQLGTTTLLE

   WD40 Template    TG---ECLRTLSGHTSGVTSVSF--SP-DGKRL-VSGSEDGTIKVWD