Input parameters:

  Query = ENSP00000308344 (Len=342)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000308344, Len=342):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSLHGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFDHPYPTTKLMWIPDT 80  
WD40-rpts                                                           (____________________WD 1__

Query       81 KGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVN 160 
WD40-rpts      __________________)           (_________________WD 2________________)           

Query      161 LVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATM 240 
WD40-rpts         (__________________WD 3__________________)     (__________________WD 4_______

Query      241 AMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDPILAYTAEGEINNVQ 320 
WD40-rpts      __________)    (_________________WD 5_________________)(____________________WD 6

Query      321 WASTQPDWIAICYNNCLEILRV 342 
WD40-rpts      ____________________) 

6 WD40-repeats found in QUERY=ENSP00000308344 (Len=342):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5    54-99       4.38  295.55  0.00646       20.0%     34.56
  WD 2:  Seg 10   111-149      5.62  346.76  0.00132       22.5%     41.80
  WD 3:  Seg 14   164-205      6.62  387.99  0.00037       27.5%     53.89
  WD 4:  Seg 18   211-251      3.69  267.06  0.01557       12.5%     57.64
  WD 5:  Seg 22   256-295      6.83  396.65  0.00028       17.5%     52.48
  WD 6:  Seg 26   296-341      4.71  309.28  0.00422        5.0%     38.21

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   54-99     EESSEFICRN------TFDHPYPTTKLMWIP-DT---K-GVYPDLLATSGDY-LRVWR
   WD 2  111-149    LNN-----NK------NSDFCAPLTSFDWNEVDP---Y-LLGT---SSIDTT-CTIWG
   WD 3  164-205    -GH---VKTQ------LIAHDKEVYDIAFSR-AGGGRD-MFAS---VGADGS-VRMFD
   WD 4  211-251    -HS---TIIY------EDPQHHPLLRLCWNKQDP---N-YLAT---MAMDGMEVVILD
   WD 5  256-295    -CT---PVAR------LNNHRACVNGIAWAP-HS---SCHICT---AADDHQ-ALIWD
   WD 6  296-341    IQQ---MPRAIEDPILAYTAEGEINNVQWAS-TQ---P-DWIA---ICYNNC-LEILR

   WD40 Template    TGE---CLRT------LSGHTSGVTSVSFSP-DG---K-RLVS---GSEDGT-IKVWD