Input parameters:

  Query = ENSP00000310943 (Len=722)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000310943, Len=722):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAVSAAALVSGGVAQAAGSGGLGGPVRPVLVAPAVSGSGGG 80  
WD40-rpts                                                                                      

Query       81 AVSTGLSRHSCAARPSAGVGGSSSSLGSGSRKRPLLAPLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCI 160 
WD40-rpts                                                                                      

Query      161 HQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNL 240 
WD40-rpts                                                                                      

Query      241 MLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSP 320 
WD40-rpts                                                                 (____________________

Query      321 SHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFT 400 
WD40-rpts      __WD 1______________________)     (________________________WD 2_________________

Query      401 RYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSS 480 
WD40-rpts      ______)       (_______________WD 3______________)     (____________________WD 4_

Query      481 YHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCC 560 
WD40-rpts      __________________)   (_________________WD 5_________________)   (______________

Query      561 VKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHI 640 
WD40-rpts      ___WD 6________________)    (________________WD 7________________)(_____________

Query      641 NEKNFVGLASNGDYIACGNENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGEENLHISGS 720 
WD40-rpts      _____WD 8__________________)(_________________WD 9________________)             

Query      721 SQ 722 
WD40-rpts        

9 WD40-repeats found in QUERY=ENSP00000310943 (Len=722):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   300-349      3.58  262.37  0.01799       22.5%     21.26
  WD 2:  Seg  4   355-407      4.94  318.70  0.00315       17.5%     26.68
  WD 3:  Seg  6   415-449      6.54  384.68  0.00041       22.5%     49.54
  WD 4:  Seg  9   455-499      6.10  366.70  0.00071       25.0%     42.26
  WD 5:  Seg 12   503-542      8.05  447.34  5.8e-05       35.0%     51.71
  WD 6:  Seg 16   546-584      5.76  352.50  0.00111       22.5%     53.21
  WD 7:  Seg 20   589-626      7.28  415.23  0.00016       27.5%     53.03
  WD 8:  Seg 24   627-668      8.16  451.87  5.1e-05       25.0%     54.80
  WD 9:  Seg 28   669-707      3.80  271.51  0.01358       17.5%     12.45

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  300-349    SGLYSPVSEDSTVPQ--FEAPSPSHSSIIDSTEYS-QPPG---FSGSSQTKK---------------QPWY
   WD 2  355-407    --------------S--RRKRLTAHFEDLEQCYFS-TRMS-RISDDSRTASQLDEFQECLSKFTRYNSVRP
   WD 3  415-449    -------------------SDLYNGSSIVSSIEFD-RDCD-YFAIAGVTKKI---------------KVYE
   WD 4  455-499    QD--------AVDIH--YPENEMTCNSKISCISWS-SYHKNLLASSDYEGTV---------------ILWD
   WD 5  503-542    -G------------Q--RSKVYQEHEKRCWSVDFNLMDPK-LLASGSDDAKV---------------KLWS
   WD 6  546-584    -D------------N--SVASIEAKAN-VCCVKFS-PSSRYHLAFGCADHCV---------------HYYD
   WD 7  589-626    -K------------Q--PIMVFKGHRKAVSYAKFV--SGE-EIVSASTDSQL---------------KLWN
   WD 8  627-668    VG------------KPYCLRSFKGHINEKNFVGLA-SNGD-YIACGNENNSL---------------YLYY
   WD 9  669-707    KG------------L--SKTLLTFKFDTVKSV-LD-KDRK-EDDTNEFVSAV---------------CWRA

   WD40 Template    TG------------E--CLRTLSGHTSGVTSVSFS-PDGK-RLVSGSEDGTI---------------KVWD