Input parameters:
Query = ENSP00000316051 (Len=821)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000316051, Len=821):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTARVNCIQWICKQDGSPSTELVS 80
WD40-rpts (_________________WD 1_________________) (___________________WD 2_________
Query 81 GGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRRTSDPALCTLIVSAAADSAVRLWSKKGPEVTWKTGQVERGR 160
WD40-rpts __________)(_______________________WD 3_______________________) (______________
Query 161 AWKPPASLALCSRSCDSMVSCYASILCKALWKEKLHTFWHHNRISFLPSAFRPIPILACGNDDCRIHIFAQQNDQFQKVL 240
WD40-rpts __WD 4________________) (___________________WD 5___________________) (____
Query 241 SLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWKLYIKSTSLETQDDDNIRLKENTFTIENESVKIAFAVTLETVLAG 320
WD40-rpts ______________WD 6_________________) (________
Query 321 HENWVNAVHWQPVFYKDGVLQQPVRLLSASMDKTMILWAPDEESGVWLEQREWTPEIVISGHFDGVQDLVWDPEGEFIIT 400
WD40-rpts _____________WD 7_____________________) (_________________WD 8______
Query 401 VGTDQTTRLFAPWKRKDQSQVTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQSLNHV 480
WD40-rpts __________) (________________WD 9________________) (________________
Query 481 LCNQDSDLPEGATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQPSILTEPPTEDHLLQNTLWPEVQKLYG 560
WD40-rpts ____WD10___________________) (________________WD11________________)(________
Query 561 HGYEIFCVTCNSSKTLLASACKAAKKEHAAIILWNTTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRDRTWSLWKKQD 640
WD40-rpts ___________WD12___________________) (_________________WD13________________)
Query 641 TISPEFEPVFSLFAFTNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLDVGGAVTA 720
WD40-rpts (_________________WD14________________) (_______
Query 721 VSVCPVLHPSQRYVVAVGLECGKICLYTWKKTDQVPEINDWTHCVETSQSQSHTLAIRKLCWKNCSGKTEQKEAEGAEWL 800
WD40-rpts ________WD15_______________)(_______________________________WD16________________
Query 801 HFASCGEDHTVKIHRVNKCAL 821
WD40-rpts ______________)
16 WD40-repeats found in QUERY=ENSP00000316051 (Len=821):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 5-44 6.41 379.64 0.00048 10.0% 51.87
WD 2: Seg 5 48-91 6.41 379.41 0.00048 27.5% 55.54
WD 3: Seg 9 92-143 6.03 363.83 0.00078 22.5% 54.81
WD 4: Seg 13 146-183 5.48 341.13 0.00157 17.5% 52.80
WD 5: Seg 17 187-230 4.62 305.52 0.00474 27.5% 47.04
WD 6: Seg 21 236-276 7.08 407.31 0.00020 27.5% 51.55
WD 7: Seg 28 312-359 6.66 389.77 0.00035 32.5% 49.80
WD 8: Seg 33 373-411 8.43 463.02 3.6e-05 22.5% 52.19
WD 9: Seg 37 423-460 5.12 326.22 0.00250 12.5% 47.86
WD10: Seg 41 464-508 4.73 310.00 0.00413 10.0% 43.25
WD11: Seg 44 514-551 4.20 288.21 0.00811 15.0% 25.07
WD12: Seg 48 552-595 6.52 384.11 0.00041 22.5% 52.90
WD13: Seg 52 599-637 9.09 490.23 1.5e-05 32.5% 55.98
WD14: Seg 56 654-692 7.54 426.10 0.00011 30.0% 44.58
WD15: Seg 60 713-748 3.81 272.04 0.01336 22.5% 40.05
WD16: Seg 64 749-815 4.00 279.73 0.01053 17.5% 44.19
Multiple sequence alignment of 16 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 5-44 VLE----T--------------SHVFCCPNRVR-GVLNWSS-------------GPR--------G------LLAFG-----TSCSVVLYD
WD 2 48-91 -RV----V--------------VTNLNGHTARV-NCIQWIC--------KQDGSPST--------E------LVSGG-----SDNQVIHWE
WD 3 92-143 IEDNQLLK--------------AVHLQGHEGPV-YAVHAVY-------------QRRTSDPALCTL------IVSAA-----ADSAVRLWS
WD 4 146-183 -GP----E--------------VTWKTGQVERG-RAW-KPP-------------ASL--------A------LCSRS-----CDSMVSCYA
WD 5 187-230 -CK----A--------------LWKEKLHTFWHHNRISFLP-------------SAF--------R--PIPILACGN-----DDCRIHIFA
WD 6 236-276 -FQ----K--------------VLSLCGHEDWI-RGVEWAA-------------FGR------DLF------LASCS-----QDCLIRIWK
WD 7 312-359 -VT----L--------------ETVLAGHENWV-NAVHWQP----VFYKDGVLQQPV--------R------LLSAS-----MDKTMILWA
WD 8 373-411 -WT----P--------------EIVISGHFDGV-QDLVWDP-------------EGE--------F------IITVG-----TDQTTRLFA
WD 9 423-460 -WH----E--------------IARPQIHGYDL-KCLAMIN-------------RFQ---------------FVSGA-----DEKVLRVFS
WD10 464-508 -NF----V--------------ENFCAITGQSL-NHVLCNQ-------------DSD--------LPEGATVPALGL-----SNKAVFQGD
WD11 514-551 -SD----E--------------EELLTSTGFEY-QQVAFQP-------------SI---------L------TEPPT-----EDHLLQNTL
WD12 552-595 -WP----E--------------VQKLYGHGYEI-FCVTCNS-------------SKT--------L------LASACKAAKKEHAAIILWN
WD13 599-637 -WK----Q--------------VQNLVFHSLTV-TQMAFSP-------------NEK--------F------LLAVS-----RDRTWSLWK
WD14 654-692 -AF----T--------------NKITSVHSRII-WSCDWSP-------------DSK--------Y------FFTGS-----RDKKVVVWG
WD15 713-748 ---------------------------DVGGAV-TAVSVCP--------VLHPSQRY--------V------VAVGL-----ECGKICLYT
WD16 749-815 WKK----TDQVPEINDWTHCVETSQSQSHTLAI-RKLCWKNCSGKTEQKEAEGAEWL--------H------FASCG-----EDHTVKIHR
WD40 Template TGE----C--------------LRTLSGHTSGV-TSVSFSP-------------DGK--------R------LVSGS-----EDGTIKVWD