Input parameters:

  Query = ENSP00000318313 (Len=1208)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000318313, Len=1208):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKVVPEKNAVRILWGRERGARAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPRSTFLLAFSPDRTLLASTHVNHNIYIT 80  
WD40-rpts                                            (___________________WD 1__________________

Query       81 EVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEVRIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEI 160 
WD40-rpts      )   (_________________WD 2_________________)  (________________WD 3_____________

Query      161 HFWDWSRREPFAVVKTASEMERVRLVRFDPLGHYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLL 240 
WD40-rpts      ___)(___________________WD 4___________________)                                

Query      241 HNFLHMLSSRSSGIQTEPFHPPEQASSTQQDQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHREI 320 
WD40-rpts        (________________WD 5_______________)                                         

Query      321 APGLTGSEWTRTVLSLNSRSEAESMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPASGLATESDGGNGSSQN 400 
WD40-rpts                                                                                      

Query      401 NSGSIRHELQCDLRRFFLEYDRLQELDQSLSGEAPQTQQAQEMLNNNIESERPGPSHQPTPHSSENNSNLSRGHLNRCRA 480 
WD40-rpts                                                                                      

Query      481 CHNLLTFNNDTLRWERTTPNYSSGEASSSWQVPSSFESVPSSGSQLPPLERTEGQTPSSSRLELSSSASPQEERTVGVAF 560 
WD40-rpts                                                                                      

Query      561 NQETGHWERIYTQSSRSGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDPARLSPAAYYAQR 640 
WD40-rpts                                                                                      

Query      641 MIQYLSRRDSIRQRSMRYQQNRLRSSTSSSSSDNQGPSVEGTDLEFEDFEDNGDRSRHRAPRNARMSAPSLGRFVPRRFL 720 
WD40-rpts                                                                                      

Query      721 LPEYLPYAGIFHERGQPGLATHSSVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIY 800 
WD40-rpts                                                                                      

Query      801 NDASCDISADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVGLASRRILLHPS 880 
WD40-rpts                                               (________________WD 6________________) 

Query      881 TEHMVAQVFRLQQAHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPEPGLGLAYGTNKGDLVICRPEALNSGVEYYWD 960 
WD40-rpts                                                                                      

Query      961 QLNETVFTVHSNSRSSERPGTSRATWRTDRDMGLMNAIGLQPRNPATSVTSQGTQTLALQLQNAETQTEREVPEPGTAAS 1040
WD40-rpts                                                                                      

Query     1041 GPGEGEGSEYGASGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTEPGAAHTSSPQPST 1120
WD40-rpts                                                                                      

Query     1121 SRGLLPEAGQLAERGLSPRTASWDQPGTPGREPTQPTLPSSSPVPIPVSLPSAEGPTLHCELTNNNHLLDGGSSRGDAAG 1200
WD40-rpts                                                                                      

Query     1201 PRGEPRNR 1208
WD40-rpts              

6 WD40-repeats found in QUERY=ENSP00000318313 (Len=1208):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    39-81       5.89  357.92  0.00093       20.0%     49.06
  WD 2:  Seg  8    85-124      8.69  473.47  2.6e-05       35.0%     51.71
  WD 3:  Seg 12   127-164      5.46  340.33  0.00161       20.0%     49.70
  WD 4:  Seg 16   165-208      5.66  348.59  0.00125       17.5%     51.51
  WD 5:  Seg 23   243-279      5.14  327.18  0.00242       20.0%     27.96
  WD 6:  Seg 35   842-879      2.79  229.77  0.04872       30.0%     38.92

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   39-81     WMK-WEGKRVELPDSPRSTFLLAFSPD-RTLLASTHVNHNIYITE
   WD 2   85-124    -GK----CVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEVRIWD
   WD 3  127-164    -GG----SESWFTDSNNAIASLAFHPT-AQLLLIATAN-EIHFWD
   WD 4  165-208    WSRREPFAVVKTASEMERVRLVRFDPL-GHYLLTAIVNPSNQQGD
   WD 5  243-279    -------FLHMLSSRSSGIQTEPFHPP-EQASSTQQDQGLLNRPS
   WD 6  842-879    -GE----MLYTKRFGPNAI-SVSLSPM-GRYVMVGLASRRILLHP

   WD40 Template    TGE----CLRTLSGHTSGVTSVSFSPD-GKRLVSGSEDGTIKVWD