Input parameters:

  Query = ENSP00000320663 (Len=981)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000320663, Len=981):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDGFAGSLDDSISAASTSDVQDRLSALESRVQQQEDEITVLKAALADVLRRLAISEDHVASVKKSVSSKGQPSPRAVIPM 80  
WD40-rpts                                                                                      

Query       81 SCITNGSGANRKPSHTSAVSIAGKETLSSAAKSGTEKKKEKPQGQREKKEESHSNDQSPQIRASPSPQPSSQPLQIHRQT 160 
WD40-rpts                                                                                      

Query      161 PESKNATPTKSIKRPSPAEKSHNSWENSDDSRNKLSKIPSTPKLIPKVTKTADKHKDVIINQEGEYIKMFMRGRPITMFI 240 
WD40-rpts                                                                                      

Query      241 PSDVDNYDDIRTELPPEKLKLEWAYGYRGKDCRANVYLLPTGKIVYFIASVVVLFNYEERTQRHYLGHTDCVKCLAIHPD 320 
WD40-rpts                                                              (_______________________

Query      321 KIRIATGQIAGVDKDGRPLQPHVRVWDSVTLSTLQIIGLGTFERGVGCLDFSKADSGVHLCIIDDSNEHMLTVWDWQKKA 400 
WD40-rpts      WD 1______________________)(_____________________WD 2_____________________)   (_

Query      401 KGAEIKTTNEVVLAVEFHPTDANTIITCGKSHIFFWTWSGNSLTRKQGIFGKYEKPKFVQCLAFLGNGDVLTGDSGGVML 480 
WD40-rpts      ________________WD 3________________)(____________________WD 4__________________

Query      481 IWSKTTVEPTPGKGPKGVYQISKQIKAHDGSVFTLCQMRNGMLLTGGGKDRKIILWDHDLNPEREIEVPDQYGTIRAVAE 560 
WD40-rpts      __)               (_________________WD 5________________)(___________________WD 

Query      561 GKADQFLVGTSRNFILRGTFNDGFQIEVQGHTDELWGLATHPFKDLLLTCAQDRQVCLWNSMEHRLEWTRLVDEPGHCAD 640 
WD40-rpts      6__________________)(_________________WD 7_________________)(__________________W

Query      641 FHPSGTVVAIGTHSGRWFVLDAETRDLVSIHTDGNEQLSVMRYSIDGTFLAVGSHDNFIYLYVVSENGRKYSRYGRCTGH 720 
WD40-rpts      D 8_________________)   (_________________WD 9________________)       (_________

Query      721 SSYITHLDWSPDNKYIMSNSGDYEILYWDIPNGCKLIRNRSDCKDIDWTTYTCVLGFQVFGVWPEGSDGTDINALVRSHN 800 
WD40-rpts      ________WD10________________)                         (___________________WD11__

Query      801 RKVIAVADDFCKVHLFQYPCSKAKAPSHKYSAHSSHVTNVSFTHNDSHLISTGGKDMSIIQWKLVEKLSLPQNETVADTT 880 
WD40-rpts      ________________)      (_________________WD12_________________)                 

Query      881 LTKAPVSSTESVIQSNTPTPPPSQPLNETAEEESRISSSPTLLENSLEQTVEPSEDHSEEESEEGSGDLGEPLYEEPCNE 960 
WD40-rpts                         (_______________WD13_______________)                         

Query      961 ISKEQAKATLLEDQQDPSPSS 981 
WD40-rpts                           

13 WD40-repeats found in QUERY=ENSP00000320663 (Len=981):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  8   297-347      6.62  388.24  0.00036       35.0%     53.13
  WD 2:  Seg 12   348-395      5.83  355.43  0.00101       22.5%     47.81
  WD 3:  Seg 16   399-437      7.14  409.66  0.00019       15.0%     53.45
  WD 4:  Seg 20   438-483      5.24  331.20  0.00214       17.5%     45.50
  WD 5:  Seg 24   499-537      7.42  421.30  0.00013       22.5%     49.52
  WD 6:  Seg 28   538-580      5.75  352.27  0.00111       12.5%     52.51
  WD 7:  Seg 32   581-620      9.17  493.33  1.4e-05       17.5%     58.59
  WD 8:  Seg 36   621-661      6.73  392.66  0.00032       22.5%     58.12
  WD 9:  Seg 40   665-703      7.84  438.38  7.7e-05       20.0%     57.62
  WD10:  Seg 44   711-749      8.64  471.45  2.8e-05       35.0%     52.57
  WD11:  Seg 50   775-817      5.77  353.21  0.00108        7.5%     55.00
  WD12:  Seg 54   824-863      6.50  383.11  0.00043       30.0%     49.37
  WD13:  Seg 59   900-935      4.44  297.93  0.00600       17.5%     27.92

Multiple sequence alignment of 13 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  297-347    YE-------ERT----QRHY---LGHTDCVKCLAIHPDKI----R-IATGQIAGVDKDGRPLQPHVRVWD
   WD 2  348-395    SV-------T-LSTLQIIGL---GTFERGVGCLDFSKADSGVHLC-IIDDSNEH----------MLTVWD
   WD 3  399-437    -K-------A-K----GAEI---KTTNEVVLAVEFHPTDA----N-TIITCGKS----------HIFFWT
   WD 4  438-483    WSGNSLTRKQ-G----IFGK---YEKPKFVQCLAFLGNGD----V-LTGDS-GG----------VMLIWS
   WD 5  499-537    -Y-------Q-I----SKQI---KAHDGSVFTLCQMRNGM----L-LTGGGKDR----------KIILWD
   WD 6  538-580    HD----LNPE-R----EIEV---PDQYGTIRAVAEGKADQ----F-LVGTSRNF----------ILRGTF
   WD 7  581-620    ND-------G-F----QIEV---QGHTDELWGLATHPFKD----L-LLTCAQDR----------QVCLWN
   WD 8  621-661    SM-------EHR----LEWT---RLVDEPGHCADFHPSGT----V-VAIGTHSG----------RWFVLD
   WD 9  665-703    -R-------D-L----VSIH---TDGNEQLSVMRYSIDGT----F-LAVGSHDN----------FIYLYV
   WD10  711-749    -Y-------S-R----YGRC---TGHSSYITHLDWSPDNK----Y-IMSNSGDY----------EILYWD
   WD11  775-817    LG-------F-Q----VFGVWPEGSDGTDINALVRSHNRK----V-IAVADDFC----------KVHLFQ
   WD12  824-863    -K-------A-P----SHKY---SAHSSHVTNVSFTHNDS----HLISTGGKDM----------SIIQWK
   WD13  900-935    -P-------P-P----SQPL---NETAEEESRISSSPT--------LLENSLEQ----------TVEPSE

   WD40 Template    TG-------E-C----LRTL---SGHTSGVTSVSFSPDGK----R-LVSGSEDG----------TIKVWD