Input parameters:
Query = ENSP00000321826 (Len=1151)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000321826, Len=1151):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MRKFNIRKVLDGLTAGSSSASQQQQQQHPPGNREPEIQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGA 80
WD40-rpts (________________WD 1____________
Query 81 LRLFGRPGVECYCQHDSGAAVIQLQFLINEGALVSALADDTLHLWNLRQKRPAILHSLKFCRERVTFCHLPFQSKWLYVG 160
WD40-rpts ____) (_________________WD 2________________) (_________________WD 3_______
Query 161 TERGNIHIVNVESFTLSGYVIMWNKAIELSSKSHPGPVVHISDNPMDEGKLLIGFESGTVVLWDLKSKKADYRYTYDEAI 240
WD40-rpts _________) (__________________WD 4__________________) (_____________
Query 241 HSVAWHHEGKQFICSHSDGTLTIWNVRSPAKPVQTITPHGKQLKDGKKPEPCKPILKVEFKTTRSGEPFIILSGGLSYDT 320
WD40-rpts ____WD 5________________)
Query 321 VGRRPCLTVMHGKSTAVLEMDYSIVDFLTLCETPYPNDFQEPYAVVVLLEKDLVLIDLAQNGYPIFENPYPLSIHESPVT 400
WD40-rpts (_________________WD 6_________________)
Query 401 CCEYFADCPVDLIPALYSVGARQKRQGYSKKEWPINGGNWGLGAQSYPEIIITGHADGSVKFWDASAITLQVLYKLKTSK 480
WD40-rpts (____________________WD 7____________________)
Query 481 VFEKSRNKDDRPNTDIVDEDPYAIQIISWCPESRMLCIAGVSAHVIIYRFSKQEVITEVIPMLEVRLLYEINDVETPEGE 560
WD40-rpts (____________________WD 8___________________)
Query 561 QPPPLPTPVGGSNPQPIPPQSHPSTSSSSSDGLRDNVPCLKVKNSPLKQSPGYQTELVIQLVWVGGEPPQQITSLAVNSS 640
WD40-rpts (______________WD
Query 641 YGLVVFGNCNGIAMVDYLQKAVLLNLGTIELYGSNDPYRREPRSPRKSRQPSGAGLCDISEGTVVPEDRCKSPTSGSSSP 720
WD40-rpts 9______________)
Query 721 HNSDDEQKMNNFIEKVKTKSRKFSKMVANDIAKMSRKLSLPTDLKPDLDVKDNSFSRSRSSSVTSIDKESREAISALHFC 800
WD40-rpts
Query 801 ETFTRKTDSSPSPCLWVGTTLGTVLVIALNLPPGGEQRLLQPVIVSPSGTILRLKGAILRMAFLDTTGCLIPPAYEPWRE 880
WD40-rpts
Query 881 HNVPEEKDEKEKLKKRRPVSVSPSSSQEISENQYAVICSEKQAKVISLPTQNCAYKQNITETSFVLRGDIVALSNSICLA 960
WD40-rpts
Query 961 CFCANGHIMTFSLPSLRPLLDVYYLPLTNMRIARTFCFTNNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP 1040
WD40-rpts
Query 1041 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGELARARLALDERGQKLGDLEE 1120
WD40-rpts
Query 1121 RTAAMLSSAESFSKHAHEIMLKYKDKKWYQF 1151
WD40-rpts
9 WD40-repeats found in QUERY=ENSP00000321826 (Len=1151):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 48-85 6.13 368.03 0.00068 20.0% 43.52
WD 2: Seg 5 88-126 6.50 383.15 0.00043 22.5% 56.71
WD 3: Seg 9 132-170 5.91 358.98 0.00090 25.0% 55.24
WD 4: Seg 14 183-224 6.16 369.15 0.00066 30.0% 47.40
WD 5: Seg 17 227-265 6.77 394.39 0.00030 20.0% 55.05
WD 6: Seg 26 340-379 4.61 305.27 0.00478 7.5% 15.29
WD 7: Seg 32 419-464 5.62 346.92 0.00131 20.0% 33.00
WD 8: Seg 37 485-529 4.37 295.04 0.00656 7.5% 44.45
WD 9: Seg 44 624-657 3.07 241.56 0.03404 17.5% 43.80
Multiple sequence alignment of 9 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 48-85 --L------CKT-VRHGFPYQPSALAFDP-VQKILAVGTQTGALRLFG
WD 2 88-126 -GV------ECY-CQHDSGAAVIQLQFLI-NEGALVSALADDTLHLWN
WD 3 132-170 -PA------ILH-SLKFCRERVTFCHLPF-QSKWLYVGTERGNIHIVN
WD 4 183-224 WNK------AIELSSKSHPGPVVHISDNPMDEGKLLIGFESGTVVLWD
WD 5 227-265 -SK------KAD-YRYTYDEAIHSVAWHH-EGKQFICSHSDGTLTIWN
WD 6 340-379 MDY------SIV-DFLTLCETPYPNDFQE-PYAVVVLLEKDLVLIDLA
WD 7 419-464 VGARQKRQGYSK-KEWPINGGNWGLGAQS-YPEIIITGHADGSVKFWD
WD 8 485-529 SRN-KDDRPNTD-IVDEDPYAIQIISWCP-ESRMLCIAGVSAHVIIYR
WD 9 624-657 VG-------------GEPPQQITSLAVNS-SYGLVVFGNCNGIAMVDY
WD40 Template TGE------CLR-TLSGHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD