Input parameters:
Query = ENSP00000324158 (Len=1121)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000324158, Len=1121):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MDALEDYVWPRATSELILLPVTGLECVGDRLLAGEGPDVLVYSLDFGGHLRMIKRVQNLLGHYLIHGFRVRPEPNGDLDL 80
WD40-rpts
Query 81 EAMVAVFGSKGLRVVKISWGQGHFWELWRSGLWNMSDWIWDARWLEGNIALALGHNSVVLYDPVVGCILQEVPCTDRCTL 160
WD40-rpts (___________________WD 1___________________) (______________
Query 161 SSACLIGDAWKELTIVAGAVSNQLLVWYPATALADNKPVAPDRRISGHVGIIFSMSYLESKGLLATASEDRSVRIWKVGD 240
WD40-rpts _____WD 2__________________) (_________________WD 3________________)(__
Query 241 LRVPGGRVQNIGHCFGHSARVWQVKLLENYLISAGEDCVCLVWSHEGEILQAFRGHQGRGIRAIAAHERQAWVITGGDDS 320
WD40-rpts ___________________WD 4____________________) (_________________WD 5____________
Query 321 GIRLWHLVGRGYRGLGVSALCFKSRSRPGTLKAVTLAGSWRLLAVTDTGALYLYDVEVKCWEQLLEDKHFQSYCLLEAAP 400
WD40-rpts _____) (________________WD 6________________) (_________________W
Query 401 GPEGFGLCAMANGEGRVKVVPINTPTAAVDQTLFPGKVHSLSWALRGYEELLLLASGPGGVVACLEISAAPSGKAIFVKE 480
WD40-rpts D 7_________________) (__________________WD 8__________________)
Query 481 RCRYLLPPSKQRWHTCSAFLPPGDFLVCGDRRGSVLLFPSRPGLLKDPGVGGKARAGAGAPVVGSGSSGGGNAFTGLGPV 560
WD40-rpts (_________________WD 9________________) (_________________WD10________________)(
Query 561 STLPSLHGKQGVTSVTCHGGYVYTTGRDGAYYQLFVRDGQLQPVLRQKSCRGMNWLAGLRIVPDGSMVILGFHANEFVVW 640
WD40-rpts _______________WD11_______________) (___________________WD12__________________
Query 641 NPRSHEKLHIVNCGGGHRSWAFSDTEAAMAFAYLKDGDVMLYRALGGCTRPHVILREGLHGREITCVKRVGTITLGPEYG 720
WD40-rpts ) (_________________WD13_________________) (______________WD14_____________)(__
Query 721 VPSFMQPDDLEPGSEGPDLTDIVITCSEDTTVCVLALPTTTGSAHALTAVCNHISSVRAVAVWGIGTPGGPQDPQPGLTA 800
WD40-rpts _______________WD15________________) (_________________WD16_______________
Query 801 HVVSAGGRAEMHCFSIMVTPDPSTPSRLACHVMHLSSHRLDEYWDRQRNRHRMVKVDPETRYMSLAVCELDQPGLGPLVA 880
WD40-rpts _) (_______________WD17____
Query 881 AACSDGAVRLFLLQDSGRILQLLAETFHHKRCVLKVHSFTHEAPNQRRRLLLCSAATDGSLAFWDLTTMLDHDSTVLEPP 960
WD40-rpts ___________) (_______________________WD18______________________)
Query 961 VDPGLPYRLGTPSLTLQAHSCGINSLHTLPTREGHHLVASGSEDGSLHVFVLAVEMLQLEEAVGEAGLVPQLRVLEEYSV 1040
WD40-rpts (__________________WD19__________________) (_____
Query 1041 PCAHAAHVTGLKILSPSIMVSASIDQRLTFWRLGHGEPTFMNSTVFHVPDVADMDCWPVSPEFGHRCALGGQGLEVYNWY 1120
WD40-rpts ___________WD20________________)
Query 1121 D 1121
WD40-rpts
20 WD40-repeats found in QUERY=ENSP00000324158 (Len=1121):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 9 99-142 4.05 282.11 0.00979 12.5% 46.09
WD 2: Seg 13 146-188 5.44 339.31 0.00166 17.5% 51.88
WD 3: Seg 17 199-237 8.47 464.47 3.4e-05 27.5% 51.61
WD 4: Seg 21 238-284 6.08 365.89 0.00073 27.5% 54.11
WD 5: Seg 25 287-326 7.73 433.94 8.8e-05 25.0% 57.99
WD 6: Seg 29 338-375 4.52 301.23 0.00542 10.0% 54.46
WD 7: Seg 33 382-421 5.59 345.50 0.00137 17.5% 47.74
WD 8: Seg 37 425-466 5.05 323.45 0.00272 15.0% 49.29
WD 9: Seg 41 481-519 6.55 385.11 0.00040 20.0% 47.32
WD10: Seg 44 521-559 5.60 346.02 0.00135 12.5% 10.30
WD11: Seg 48 560-595 5.45 339.95 0.00163 15.0% 43.50
WD12: Seg 52 599-641 6.39 378.71 0.00049 20.0% 55.68
WD13: Seg 56 644-683 4.40 296.21 0.00633 15.0% 53.41
WD14: Seg 60 685-717 4.80 312.94 0.00377 17.5% 34.39
WD15: Seg 64 718-756 6.31 375.48 0.00054 12.5% 21.51
WD16: Seg 66 764-802 6.37 377.86 0.00050 15.0% 28.74
WD17: Seg 72 857-892 6.00 362.45 0.00081 12.5% 35.67
WD18: Seg 75 895-945 6.72 392.35 0.00032 22.5% 37.62
WD19: Seg 78 970-1011 4.59 304.44 0.00490 35.0% 46.11
WD20: Seg 84 1035-1072 6.19 370.20 0.00064 22.5% 46.11
Multiple sequence alignment of 20 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 99-142 WG---------QGHFWELWRSGLWNMS-----------D-WIWD----ARWLEGNI---AL-AL-G--HNSVVLYD
WD 2 146-188 -G---------C------ILQEVPCTD-----------R-CTLSSACLIGDAWKEL---TI-VA-GAVSNQLLVWY
WD 3 199-237 -V---------A------PDRRISGHV-----------G-IIFS----MSYLESKG---LL-AT-ASEDRSVRIWK
WD 4 238-284 VGDLRVPGGRVQ------NIGHCFGHS-----------A-RVWQ----VKLLEN-----YL-IS-AGEDCVCLVWS
WD 5 287-326 -G---------E------ILQAFRGHQ-----------GRGIRA----IAAHERQA---WV-IT-GGDDSGIRLWH
WD 6 338-375 -S---------A------LCFKSRSRP-----------G-TLKA----VTLAGSWR---LL-AV--TDTGALYLYD
WD 7 382-421 -E---------Q------LLEDKHFQS-----------Y-CLLE----AAPGPEGF---GLCAM-ANGEGRVKVVP
WD 8 425-466 -P---------T------AAVDQTLFP-----------G-KVHS----LSWALRGYEELLL-LA-SGPGGVVACLE
WD 9 481-519 -R---------C------RYLLPPSKQ-----------R-WHTC----SAFLPPGD---FL-VC-GDRRGSVLLFP
WD10 521-559 -R---------P------GLLKDPGVG-----------G-KARA----GAGAPVVG---SG-SS-GGGNAFTGLGP
WD11 560-595 -------------------VSTLPSLH-----------G-KQGV----TSVTCHGG---YV-YT-TGRDGAYYQLF
WD12 599-641 -G---------Q------LQPVLRQKS-------CRGMN-WLAG----LRIVPDGS---MV-IL-GFHANEFVVWN
WD13 644-683 -S---------H------EKLHIVNCG-----------G-GHRS----WAFSDTEA---AM-AFAYLKDGDVMLYR
WD14 685-717 ----------------------LGGCT-----------R-PHVI----LREGLHGR---EI-TC-VKRVGTITLGP
WD15 718-756 -E---------Y------GVPSFMQPD-----------D-LEPG----SEGPDLTD---IV-IT-CSEDTTVCVLA
WD16 764-802 -A---------H------ALTAVCNHI-----------S-SVRA----VAVWGIGT---PG-GP-QDPQPGLTAHV
WD17 857-892 DP---------E----------TRYMS-----------L-AVCE----LDQPGLGP---LV-AA-ACSDGAVRLFL
WD18 895-945 DS---------G------RILQLLAETFHHKRCVLKVHS-FTHE----APNQRRRL---LL-CS-AATDGSLAFWD
WD19 970-1011 -G---------T------PSLTLQAHS-----------C-GINS----LHTLPTREGHHLV-AS-GSEDGSLHVFV
WD20 1035-1072 -L---------E------EYSVPCAHA-----------A-HVTG----LKIL-SPS---IM-VS-ASIDQRLTFWR
WD40 Template TG---------E------CLRTLSGHT-----------S-GVTS----VSFSPDGK---RL-VS-GSEDGTIKVWD