Input parameters:

  Query = ENSP00000329419 (Len=906)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000329419, Len=906):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQ 80  
WD40-rpts         (_________________WD 1_________________)   (_________________WD 2____________

Query       81 IRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 160 
WD40-rpts      ____)   (_________________WD 3________________)(___________________WD 4_________

Query      161 ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240 
WD40-rpts      __________)(___________________WD 5___________________)   (_________________WD 6

Query      241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHS 320 
WD40-rpts      ________________)   (_________________WD 7________________)(_________________WD 

Query      321 EVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDS 400 
WD40-rpts      8_________________)                                   (__________________WD 9___

Query      401 SEYAIRESNSIVKIFKNFKEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA 480 
WD40-rpts      _______________)                                                                

Query      481 TEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSVNRLNYYVGGEIVTIAHLDRT 560 
WD40-rpts          (____________________WD10____________________)                 (____________

Query      561 MYLLGYIPKDNRLYLGDKELNIISYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTD 640 
WD40-rpts      _____WD11________________)                                                      

Query      641 PEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAE 720 
WD40-rpts                                                                                      

Query      721 RDGKNNVAFMSYFLQGKVDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKVNQKAAESLADPTEYENLFPG 800 
WD40-rpts                                                                                      

Query      801 LKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEGKDFQPSRSTAQQELDGKPASPTPVIVASHTANKEEKSLLEL 880 
WD40-rpts                                                                                      

Query      881 EVDLDNLELEDIDTTDINLDEDILDD 906 
WD40-rpts                                

11 WD40-repeats found in QUERY=ENSP00000329419 (Len=906):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     4-43       6.14  368.33  0.00068       22.5%     56.12
  WD 2:  Seg  5    47-85       6.72  392.16  0.00032       20.0%     56.69
  WD 3:  Seg  9    89-127      7.93  442.40  6.8e-05       22.5%     53.79
  WD 4:  Seg 13   128-171      7.75  434.68  8.6e-05       37.5%     55.46
  WD 5:  Seg 17   172-215      7.95  443.26  6.6e-05       37.5%     51.57
  WD 6:  Seg 21   219-257      9.70  515.15  7.1e-06       40.0%     54.54
  WD 7:  Seg 25   261-299      4.86  315.37  0.00350       20.0%     53.45
  WD 8:  Seg 29   300-339      3.42  256.12  0.02180       12.5%     36.07
  WD 9:  Seg 36   375-416      3.63  264.58  0.01680        5.0%     41.62
  WD10:  Seg 47   485-530      3.40  255.22  0.02241       15.0%     18.11
  WD11:  Seg 52   548-586      2.83  231.44  0.04631       20.0%     53.18

Multiple sequence alignment of 11 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    4-43     RL--D---IKRKL------TARSDRVKSVDLHP-TEPW--MLASLYNGSVCVWN
   WD 2   47-85     -Q--T---LVKTF------EVCDLPVRAAKFVA-RKNW--VVTGADDMQIRVFN
   WD 3   89-127    -L--E---RVHMF------EAHSDYIRCIAVHP-TQPF--ILTSSDDMLIKLWD
   WD 4  128-171    WD--KKWSCSQVF------EGHTHYVMQIVINPKDNNQ--FASASLDRTIKVWQ
   WD 5  172-215    LGSSS---PNFTL------EGHEKGVNCIDYYS-GGDKPYLISGADDRLVKIWD
   WD 6  219-257    -K--T---CVQTL------EGHAQNVSCASFHP-ELPI--IITGSEDGTVRIWH
   WD 7  261-299    -Y--R---LESTL------NYGMERVWCVASLR-GSNN--VALGYDEGSIIVKL
   WD 8  300-339    GR--E---EPAMS------MDANGKIIWAKHSE-VQQA--NLKAMGDAEIKDGE
   WD 9  375-416    YIIYT---AMALR------NKSFGSAQEFAWAH-DSSE--YAIRESNSIVKIFK
   WD10  485-530    FF--I---LKYLSEKVLAAQETHEGVTEDGIED-AFEV--LGEIQEIVKTGLWV
   WD11  548-586    GG--E---IV-TI------AHLDRTMYLLGYIP-KDNR--LYLGDKELNIISYS

   WD40 Template    TG--E---CLRTL------SGHTSGVTSVSFSP-DGKR--LVSGSEDGTIKVWD