Input parameters:

  Query = ENSP00000336566 (Len=325)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000336566, Len=325):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGKMVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASC 80  
WD40-rpts      (___________________WD 1___________________)(____________________WD 2___________

Query       81 SYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVS 160 
WD40-rpts      _________)     (__________________WD 3_________________)      (_________________

Query      161 WAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD 240 
WD40-rpts      ________WD 4_________________________)      (___________________WD 5____________

Query      241 GRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNKGQGSVSASVTEG 320 
WD40-rpts      ______)           (_______________WD 6______________)                           

Query      321 QQNEQ 325 
WD40-rpts           

6 WD40-repeats found in QUERY=ENSP00000336566 (Len=325):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-44       8.69  473.81  2.6e-05       22.5%     56.65
  WD 2:  Seg  5    45-90       7.47  423.37  0.00012       27.5%     54.73
  WD 3:  Seg  9    96-136      7.78  436.24  8.2e-05       37.5%     54.81
  WD 4:  Seg 13   143-198      6.92  400.44  0.00025       37.5%     52.56
  WD 5:  Seg 17   205-247      7.56  427.02  0.00011       25.0%     54.12
  WD 6:  Seg 21   259-293      7.61  429.05  0.00010       20.0%     49.48

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-44     MGK----MVSVINTVDTSHEDMIHDAQMDYY----G-----------------TRLATCSSDRSVKIFD
   WD 2   45-90     VRNGGQILIADL----RGHEGPVWQVAWAHP--MYG-----------------NILASCSYDRKVIIWR
   WD 3   96-136    -WE----KSHEH----AGHDSSVNSVCWAPH--DYG-----------------LILACGSSDGAISLLT
   WD 4  143-198    -WE----VKKIN----NAHTIGCNAVSWAPA----VVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWK
   WD 5  205-247    -WK----EEQKL----EAHSDWVRDVAWAPSIGLPT-----------------STIASCSQDGRVFIWT
   WD 6  259-293    ---------KLL----HKFNDVVWHVSWSIT----A-----------------NILAVSGGDNKVTLWK

   WD40 Template    TGE----CLRTL----SGHTSGVTSVSFSPD----G-----------------KRLVSGSEDGTIKVWD