Input parameters:

  Query = ENSP00000339164 (Len=571)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000339164, Len=571):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHESRATEALCWAEGQRLFSAGLN 80  
WD40-rpts      (___________________WD 1___________________)(___________________WD 2____________

Query       81 GEIMEYDLQALNIKYAMDAFGGPIWSMAASPSGSQLLVGCEDGSVKLFQITPDKIQFERNFDRQKSRILSLSWHPSGTHI 160 
WD40-rpts      ______)   (_________________WD 3________________)(___________________WD 4_______

Query      161 AAGSIDYISVFDVKSGSAVHKMIVDRQYMGVSKRKCIVWGVAFLSDGTIISVDSAGKVQFWDSATGTLVKSHLIANADVQ 240 
WD40-rpts      ___________)            (________________WD 5________________)   (______________

Query      241 SIAVADQEDSFVVGTAEGTVFHFQLVPVTSNSSEKQWVRTKPFQHHTHDVRTVAHSPTALISGGTDTHLVFRPLMEKVEV 320 
WD40-rpts      ___WD 6________________)            (________________WD 7_______________)(______

Query      321 KNYDAALRKITFPHRCLISCSKKRQLLLFQFAHHLELWRLGSTVATGTVEAMCLLAVSPDGNWLAASGTSAGVHVYNVKQ 400 
WD40-rpts      __________WD 8_______________)          (________________WD 9_______________)   

Query      401 LKLHCTVPAYNFPVTAMAIAPNTNNLVIAHSDQQVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDTPITHISFHPKRPMH 480 
WD40-rpts      (_________________WD10________________)               (_________________WD11____

Query      481 ILLHDAYMFCIIDKSLPLPNDKTLLYNPFPPTNESDVIRRRTAHAFKISKIYKPLLFMDLLDERTLVAVERPLDDIIAQL 560 
WD40-rpts      ____________)                                                                   

Query      561 PPPIKKKKFGT 571 
WD40-rpts                 

11 WD40-repeats found in QUERY=ENSP00000339164 (Len=571):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-44       8.52  466.55  3.2e-05       27.5%     56.64
  WD 2:  Seg  5    45-87       8.30  457.64  4.2e-05       27.5%     56.59
  WD 3:  Seg  9    91-129      9.02  487.33  1.7e-05       25.0%     58.00
  WD 4:  Seg 13   130-172      7.15  409.86  0.00019       30.0%     50.19
  WD 5:  Seg 18   185-222      6.29  374.41  0.00056       25.0%     40.43
  WD 6:  Seg 21   226-264      8.48  465.08  3.4e-05       17.5%     54.20
  WD 7:  Seg 25   277-313      6.30  374.72  0.00055       25.0%     50.89
  WD 8:  Seg 29   314-350      5.39  337.14  0.00178       12.5%     44.08
  WD 9:  Seg 34   361-397      7.70  432.71  9.2e-05       17.5%     49.13
  WD10:  Seg 37   401-439      8.38  460.73  3.8e-05       17.5%     57.13
  WD11:  Seg 41   455-493      7.33  417.60  0.00015       12.5%     50.77

Multiple sequence alignment of 11 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-44     MG----E---FKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYN
   WD 2   45-87     LS----ANYFQ----EKFFPGHESRATEALCWAEGQRLFSAGLNGEIMEYD
   WD 3   91-129    -L----N---I----KYAMDAFGGPIWSMAASPSGSQLLVGCEDGSVKLFQ
   WD 4  130-172    ITPDKIQ---F----ERNFDRQKSRILSLSWHPSGTHIAAGSID-YISVFD
   WD 5  185-222    -D----R---Q----YMGVSKRKCIVWGVAFLSDGTIISVDS-AGKVQFWD
   WD 6  226-264    -G----T---L----VKSHLIANADVQSIAVADQEDSFVVGTAEGTVFHFQ
   WD 7  277-313    -W----V---R----TKPFQHHTHDVRTVAHSPTA--LISGGTDTHLVFRP
   WD 8  314-350    LM----E---K----V-EVKNYDAALRKITFP--HRCLISCSKKRQLLLFQ
   WD 9  361-397    GS----T----------VATGTVEAMCLLAVSPDGNWLAASGTSAGVHVYN
   WD10  401-439    -L----K---L----HCTVPAYNFPVTAMAIAPNTNNLVIAHSDQQVFEYS
   WD11  455-493    -Q----G---F----HHLWLQRDTPITHISFHPKRPMHILLHDAYMFCIID

   WD40 Template    TG----E---C----LRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD