Input parameters:

  Query = ENSP00000339430 (Len=612)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000339430, Len=612):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREAEALLQSMGLTPESPIVPPPM 80  
WD40-rpts                                                                                      

Query       81 SPSSKSVSTPSEAGSQDSGDGAVGSRRGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIE 160 
WD40-rpts                                                                                      

Query      161 PEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLS 240 
WD40-rpts                                                                                      

Query      241 LNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPN 320 
WD40-rpts                                                              (_________________WD 1__

Query      321 LVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH 400 
WD40-rpts      ______________)           (_________________WD 2________________)(______________

Query      401 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHLFVTSSFDWTV 480 
WD40-rpts      ________WD 3_____________________)     (____________________WD 4________________

Query      481 KLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIA 560 
WD40-rpts      ___)   (_________________WD 5_________________)(____________________WD 6________

Query      561 VGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRADAEEEAATRIPA 612 
WD40-rpts      ___________)                                        

6 WD40-repeats found in QUERY=ENSP00000339430 (Len=612):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   297-335      3.79  271.35  0.01364       15.0%     51.11
  WD 2:  Seg 11   347-385      5.20  329.63  0.00225       30.0%     46.11
  WD 3:  Seg 14   386-434      2.99  238.37  0.03752       30.0%     48.00
  WD 4:  Seg 18   440-484      5.13  326.70  0.00246       22.5%     43.80
  WD 5:  Seg 21   488-527      4.70  308.76  0.00429       20.0%     53.01
  WD 6:  Seg 25   528-572      4.45  298.43  0.00591       15.0%     55.29

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  297-335    -TT-----P--------EYVFHCQSAVMSATFA--KF-H------PNLV-VGGTYSGQIVLWD
   WD 2  347-385    TP----------------LSAAAHTHPVYCVNVVGTQ-N------AHNL-ISISTDGKICSWS
   WD 3  386-434    LDM-----LSHPQDSMELVHKQSKAVAVTSMSF--PVGD------VNNF-VVGSEEGSVYTAC
   WD 4  440-484    -AG-----I--------SEMFEGHQGPITGIHC--HA-AVGAVDFSHLF-VTSSFDWTVKLWT
   WD 5  488-527    -NK-----P--------LYSFEDNADYVYDVMW--SP-T------HPALFACVDGMGRLDLWN
   WD 6  528-572    LNNDTEVPT--------ASISVEGNPALNRVRW--TH-S------GREI-AVGDSEGQIVIYD

   WD40 Template    TGE-----C--------LRTLSGHTSGVTSVSF--SP-D------GKRL-VSGSEDGTIKVWD