Input parameters:

  Query = ENSP00000340877 (Len=636)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000340877, Len=636):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAEAVERTDELVREYLLFRGFTHTLRQLDAEIKADKEKGFRVDKIVDQLQQLMQVYDLAALRDYWSYLERRLFSRLEDIY 80  
WD40-rpts                                                                                      

Query       81 RPTIHKLKTSLFRFYLVYTIQTNRNDKAQEFFAKQATELQNQAEWKDWFVLPFLPSPDTNPTFATYFSRQWADTFIVSLH 160 
WD40-rpts                                                                                      

Query      161 NFLSVLFQCMPVPVILNFDAECQRTNQVQEENEVLRQKLFALQAEIHRLKKEEQQPEEEEALVQHKLPPYVSNMDRLGDS 240 
WD40-rpts                                                                                      

Query      241 ELAMVCSQRNASLSQSPRVGFLSSLLPQSKKSPSRLSPAQGPPQPQSSAKKESFGGQGTKGKDPTSGAKDGKSLLSGLAT 320 
WD40-rpts                                                                                      

Query      321 GESGWSQHRQRRLQDHGKERKELFSTTTSQCAEKKPEASGPEAEPCPELHTEPVEPLTRASSAGPEGGGVRPEQPFIVLG 400 
WD40-rpts                                                                                    (_

Query      401 QEEYGEHHSSIMHCRVDCSGRRVASLDVDGVIKVWSFNPIMQTKASSISKSPLLSLEWATKRDRLLLLGSGVGTVRLYDT 480 
WD40-rpts      _______________WD 1________________)   (_________________WD 2_________________) 

Query      481 EAKKNLCEININDNMPRILSLACSPNGASFVCSAAAPSLTSQVDFSAPDIGSKGMNQVPGRLLLWDTKTMKQQLQFSLDP 560 
WD40-rpts          (_________________WD 3________________)                       (_____________

Query      561 EPIAINCTAFNHNGNLLVTGAADGVIRLFVHPVEHPQEWPQGIRVQPPLRCHGPLCAVWIQRLQAGSSPQGPTLRF 636 
WD40-rpts      ______WD 4___________________)                                              

4 WD40-repeats found in QUERY=ENSP00000340877 (Len=636):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4   399-436      8.90  482.44  2.0e-05       30.0%     44.34
  WD 2:  Seg  7   440-479      7.32  416.86  0.00015       22.5%     45.70
  WD 3:  Seg 11   485-523      7.62  429.45  0.00010       15.0%     41.62
  WD 4:  Seg 15   547-590      8.47  464.57  3.4e-05       25.0%     49.79

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  399-436    LG----Q--EEYGEHHSSIMHCRVDCS-GRRVASLDVDGVIKVWS
   WD 2  440-479    -I----MQTKASSISKSPLLSLEWATKRDRLLLLGSGVGTVRLYD
   WD 3  485-523    -N----LCEININDNMPRILSLACSPN-GASFVCSAAAPSLTSQV
   WD 4  547-590    TKTMKQQLQFSLDPEPIAINCTAFNHN-GNLLVTGAADGVIRLFV

   WD40 Template    TG----ECLRTLSGHTSGVTSVSFSPD-GKRLVSGSEDGTIKVWD