Input parameters:

  Query = ENSP00000340960 (Len=634)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000340960, Len=634):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKIRYISALNCFGSCSLDSNHSLVLESLKRLEDNLPVREFSMPRGANTFCYCVKANVIVTGGDDKVIRLWHPNISTKPVG 80  
WD40-rpts                                 (___________________WD 1___________________)    (____

Query       81 KLVGHMFSIAEIVTNEKDQHVVSLSSAKVFRVWDIQTLSLLQVFHDSQGGPGDMQIYSMIYDANHGMLITGSSVMDMYPL 160 
WD40-rpts      _____________WD 2________________)   (___________________WD 3___________________

Query      161 TRMIQDTKQVPHTHEREINVMLYNKYFHQVLTICSESIIRVWELETGLQVYQILEPHGFNTEVTSAAVDESGFLFATGAY 240 
WD40-rpts      )   (_________________WD 4________________)      (_________________WD 5_________

Query      241 NGTVRIWDFGSGQEMKVLPEGKDWKEDEHCLRRLIFLKAQEKHQQLVLALERNGTIKMIQGKEDDIYLMVIWELPDVVPF 320 
WD40-rpts      _______)   (_________________WD 6________________)                              

Query      321 LQDGKHAVHLRMSTRDRNMAIPFPDVELIVERNFSQPTDNPTMDLLRVNCIDLLQVEGYNLIAAGTLNEGHVILCNISSF 400 
WD40-rpts           (_________________WD 7________________)   (_________________WD 8___________

Query      401 LDPPHDEKKFKQLLSWRAHSLEIIQVIYVEEKQVVLTASIDGSVRLWHALNGHYCGYFGQRRLFELSQTRDFILPCDVTE 480 
WD40-rpts      _____)   (_________________WD 9________________)          (_________________WD10

Query      481 YPIEIKEESKFTEKQKYEYPLIFDREKWRKMSSVSLLFKRTPPKAFEVEQDFKFFKSLSSPKIRRYPLEGFVTENREAGI 560 
WD40-rpts      _________________)                                                              

Query      561 VFGSLPIYSISSPTSLRFLPLIGVEAQKDSSDGITGKKKGGHVQREKAPRRRSLKKNLVPQINLASSFFPAIPK 634 
WD40-rpts                                                                                

10 WD40-repeats found in QUERY=ENSP00000340960 (Len=634):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    28-71       6.78  394.72  0.00030       17.5%     44.12
  WD 2:  Seg  8    76-114      8.52  466.67  3.2e-05       22.5%     56.78
  WD 3:  Seg 12   118-161      6.29  374.35  0.00056       15.0%     55.88
  WD 4:  Seg 16   165-203      7.99  444.89  6.3e-05       10.0%     54.08
  WD 5:  Seg 20   210-248      7.93  442.34  6.8e-05       25.0%     47.80
  WD 6:  Seg 24   252-290      3.95  277.69  0.01122        7.5%     48.02
  WD 7:  Seg 31   326-364      5.14  327.06  0.00243       15.0%     47.03
  WD 8:  Seg 35   368-406      7.26  414.44  0.00016       10.0%     47.14
  WD 9:  Seg 38   410-448      8.14  450.78  5.2e-05       17.5%     56.48
  WD10:  Seg 43   459-498      2.99  238.19  0.03772       10.0%     22.37

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   28-71     LKRLEDNLPVREFSMPRG-----ANTFCYCVKANVIVTGGDDKVI--RLWH
   WD 2   76-114    -TKPVGKLV----GHMFS-----IAEIVTNEKDQHVVSLSSAKVF--RVWD
   WD 3  118-161    -LSLLQVFH----DSQGGPGDMQIYSMIYDANHGMLITGSSVMDM--YPLT
   WD 4  165-203    -QDTKQVPH----THERE-----INVMLYNKYFHQVLTICSESII--RVWE
   WD 5  210-248    -VYQILEPH----GFNTE-----VTSAAVDESGFLFATGAYNGTV--RIWD
   WD 6  252-290    -GQEMKVLP----EGKDW-----KEDEHCLRRLIFLKAQEKHQQL--VLAL
   WD 7  326-364    ---HAVHLR----MSTRD-----RNMAIPFPDVELIVERNFSQPTDNPTMD
   WD 8  368-406    -VNCIDLLQ----VEGYN-----LIAAGTLNEGHVILCNISSFLD--PPHD
   WD 9  410-448    -FKQLLSWR----AHSLE-----IIQVIYVEEKQVVLTASIDGSV--RLWH
   WD10  459-498    GQRRLFELS----QTRDF-----ILPCDVTEYPIEIKEESKFTEK--QKYE

   WD40 Template    TGECLRTLS----GHTSG-----VTSVSFSPDGKRLVSGSEDGTI--KVWD