Input parameters:

  Query = ENSP00000341161 (Len=389)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000341161, Len=389):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MERKDFETWLDNISVTFLSLTDLQKNETLDHLISLSGAVQLRHLSNNLETLLKRDFLKLLPLELSFYLLKWLDPQTLLTC 80  
WD40-rpts                                                                                      

Query       81 CLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQDALHWKKVYLKAILRMKQLEDHEAFETSSLIGHSARVYALYYKDGL 160 
WD40-rpts                           (____________________WD 1____________________)   (_________

Query      161 LCTVFSVDYNDELDILVSGSADFTVKVWALSAGTCLNTLTGHTEWVTKVVLQKCKVKSLLHSPGDYILLSADKYEIKIWP 240 
WD40-rpts      ________WD 2________________)   (_____________________WD 3_____________________)

Query      241 IGREINCKCLKTLSVSEDRSICLQPRLHFDGKYIVCSSALGLYQWDFASYDILRVIKTPEIANLALLGFGDIFALLFDNR 320 
WD40-rpts            (_________________WD 4_________________)(_________________WD 5____________

Query      321 YLYIMDLRTESLISRWPLPEYRKSKRGSSFLAGEASWLNGLDGHNDTGLVFATSMPDHSIHLVLWKEHG 389 
WD40-rpts      _____)                  (_________________WD 6_________________)     

6 WD40-repeats found in QUERY=ENSP00000341161 (Len=389):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   102-147      5.07  323.90  0.00268        5.0%     15.28
  WD 2:  Seg  5   151-189      9.66  513.82  7.4e-06       37.5%     50.85
  WD 3:  Seg  9   193-240      8.42  462.63  3.6e-05       37.5%     53.29
  WD 4:  Seg 13   247-286      6.01  362.72  0.00080       30.0%     51.24
  WD 5:  Seg 17   287-326      6.49  382.90  0.00043        7.5%     51.27
  WD 6:  Seg 21   345-384      5.81  354.86  0.00103       17.5%     43.27

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  102-147    CKNLGWQIDDSVQDALHWKKVYLKA--ILR---------M-KQLEDHEAFETSSLIGH
   WD 2  151-189    -VYALYYK------DGLLCTVFSVD--YND---------E-LDILVSGSADFTVKVWA
   WD 3  193-240    -GTCLNTL------TGHTEWVTKVV--LQKCKVKSLLHSP-GDYILLSADKYEIKIWP
   WD 4  247-286    -CKCLKTL------SVSEDRSICLQPRLHF---------D-GKYIVCSS-ALGLYQWD
   WD 5  287-326    FASYDILR------VIKTPEIANLA--LLG---------F-GDIFALLFDNRYLYIMD
   WD 6  345-384    -KRGSSFL------AGEASWLNGLD--GHN---------DTGLVFATSMPDHSIHLVL

   WD40 Template    TGECLRTL------SGHTSGVTSVS--FSP---------D-GKRLVSGSEDGTIKVWD