Input parameters:

  Query = ENSP00000345350 (Len=810)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000345350, Len=810):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKLLKPTWVNHNGKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMSPVLQEDDEKDENIPKMLCQMDNHLACVNCVRWSN 80  
WD40-rpts      (___________________WD 1___________________)               (_________________WD 

Query       81 SGMYLASGGDDKLIMVWKRATYIGPSTVFGSSGKLANVEQWRCVSILRNHSGDVMDVAWSPHDAWLASCSVDNTVVIWNA 160 
WD40-rpts      2________________)                      (_________________WD 3________________) 

Query      161 VKFPEILATLRGHSGLVKGLTWDPVGKYIASQADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSA 240 
WD40-rpts         (_________________WD 4________________)           (__________________WD 5____

Query      241 HAMNNSGPTAQIIEREGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSAKPSCPYCCCAVGSKDRSLSVWLTCLKRPL 320 
WD40-rpts      _____________)   (_________________________WD 6_________________________)    (__

Query      321 VVIHELFDKSIMDISWTLNGLGILVCSMDGSVAFLDFSQDELGDPLSEEEKSRIHQSTYGKSLAIMTEAQLSTAVIENPE 400 
WD40-rpts      _______________WD 7________________)(_________________WD 8_________________)    

Query      401 MLKYQRRQQQQQLDQKSAATREMGSATSVAGVVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSTAFFN 480 
WD40-rpts            (_________________WD 9________________)                                   

Query      481 SIPLSGSLAGTMLSSHSSPQLLPLDSSTPNSFGASKPCTEPVVAASARPAGDSVNKDSMNATSTPAALSPSVLTTPSKIE 560 
WD40-rpts                                                  (__________________WD10_____________

Query      561 PMKAFDSRFTERSKATPGAPALTSMTPTAVERDVHRQVVVVKEESLHSILAGSDMTVSQILLTQHGIPVMNLSDGKAYCF 640 
WD40-rpts      _____)                                   (_____________________WD11_____________

Query      641 NPSLSTWNLVSDKQDSLAQCADFRSSLPSQDAMLCSGPLAIIQGRTSNSGRQAARLFSVPHVVQQETTLAYLENQVAAAL 720 
WD40-rpts      _______)                                                                        

Query      721 TLQSSHEYRHWLLVYARYLVNEGFEYRLREICKDLLGPVHYSTGSQWESTVVGLRKRELLKELLPVIGQNLRFQRLFTEC 800 
WD40-rpts                                                                                      

Query      801 QEQLDILRDK 810 
WD40-rpts                

11 WD40-repeats found in QUERY=ENSP00000345350 (Len=810):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-44       6.57  386.15  0.00039       25.0%     52.17
  WD 2:  Seg  5    60-98       8.18  452.40  5.0e-05       32.5%     50.69
  WD 3:  Seg  9   121-159      8.16  451.57  5.1e-05       32.5%     54.62
  WD 4:  Seg 13   164-202      9.66  513.78  7.4e-06       37.5%     55.28
  WD 5:  Seg 18   214-254      5.37  336.53  0.00181       30.0%     41.03
  WD 6:  Seg 21   258-313      6.08  365.65  0.00073       30.0%     56.88
  WD 7:  Seg 25   318-356      6.98  402.85  0.00023       15.0%     57.35
  WD 8:  Seg 29   357-396      3.47  258.04  0.02055       12.5%     23.94
  WD 9:  Seg 31   407-445      6.05  364.74  0.00076       10.0%     12.04
  WD10:  Seg 35   525-566      3.45  257.12  0.02114       15.0%     -0.43
  WD11:  Seg 36   602-648      4.14  285.59  0.00879       20.0%     36.82

Multiple sequence alignment of 11 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-44     MKLLKP--T-WVNHNGKPIFSVDIHPD-----------------GTKFATGGQGQD------SGKVVIWN
   WD 2   60-98     -PKMLC--Q-MDNHLA-CVNCVRWSNS-----------------GMYLASGG---D------DKLIMVWK
   WD 3  121-159    -WRCVS--I-LRNHSG-DVMDVAWSPH-----------------DAWLASCS---V------DNTVVIWN
   WD 4  164-202    -PEILA--T-LRGHSG-LVKGLTWDPV-----------------GKYIASQA---D------DRSLKVWR
   WD 5  214-254    KP---F--D-ECGGTT-HVLRLSWSPD-----------------GHYLVSAH---A--MNNSGPTAQIIE
   WD 6  258-313    -WKTNM--D-FVGHRK-AVTVVKFNPKIFKKKQKNGSSAKPSCPYCCCAVGS---K------DRSLSVWL
   WD 7  318-356    -RPLVV--I-HELFDK-SIMDISWTLN-----------------GLGILVCS---M------DGSVAFLD
   WD 8  357-396    FSQDEL--G-DPLSEE-EKSRIHQSTY-----------------GKSLAIMT---E------AQLSTAVI
   WD 9  407-445    -RQQQQ--Q-LDQKSA-ATREMGSATS-----------------VAGVVNGE---S------LEDIRKNL
   WD10  525-566    ASARPAGDS-VNKDSM-NATSTPAALS-----------------PSVLTTPS---K------IEPMKAFD
   WD11  602-648    KEESLH--SILAGSDM-TVSQILLTQH-----------------GIPVMNLS---DGKAYCFNPSLSTWN

   WD40 Template    TGECLR--T-LSGHTS-GVTSVSFSPD-----------------GKRLVSGS---E------DGTIKVWD