Input parameters:

  Query = ENSP00000346416 (Len=252)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000346416, Len=252):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDLCKNRLVSGGRDCQVKVWDVDTGKCLKTFRHKDPILATRINDTYIVSSCERGLVKVWHIAMAQLVKTLSGHEGAVKCL 80  
WD40-rpts      (________WD 1_______)   (_______________WD 2_______________)   (________________

Query       81 FFDQWHLLSGSTDGLVMAWSMVGKYERCLMAFKHPKEVLDVSLLFLRVISACADGKIRIYNFFNGNCMKVIKANGRGDPV 160 
WD40-rpts      WD 3_______________)  (_________________WD 4________________)   (_______________

Query      161 LSFFIQGNRISVCHISTFAKRINVGWNGIEPSATAQGGNASLTECAHVRLHIAGHLPASRLPVAAVQPMTGGMAPTTAPT 240 
WD40-rpts      __WD 5________________)   (___________________WD 6___________________)          

Query      241 HVLAMLILFSGV 252 
WD40-rpts                  

6 WD40-repeats found in QUERY=ENSP00000346416 (Len=252):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-21       3.47  258.11  0.02051       25.0%     25.79
  WD 2:  Seg  3    25-60       6.51  383.41  0.00042       30.0%     49.89
  WD 3:  Seg  7    64-100      8.28  456.84  4.3e-05       37.5%     53.80
  WD 4:  Seg 11   103-141      9.05  488.59  1.6e-05       22.5%     54.76
  WD 5:  Seg 15   145-183      8.92  482.99  1.9e-05       20.0%     51.31
  WD 6:  Seg 19   187-230      3.60  263.20  0.01754        7.5%     28.87

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-21     -----------------------MDLCKNRLVSGGRDCQVKVWD
   WD 2   25-60     GKCLKTF-RHK-----DPI--LATRINDTYIVSSCERGLVKVWH
   WD 3   64-100    AQLVKTLSGHE-----GAVKCLFF--DQWHLLSGSTDGLVMAWS
   WD 4  103-141    GKYERCLMAFK-----HPKEVLDVSLLFLRVISACADGKIRIYN
   WD 5  145-183    GNCMKVIKANG-----RGDPVLSFFIQGNRISVCHISTFAKRIN
   WD 6  187-230    NGIEPSATAQGGNASLTECAHVRLHIAGHLPASRLPVAAVQPMT

   WD40 Template    GECLRTLSGHT-----SGVTSVSFSPDGKRLVSGSEDGTIKVWD