Input parameters:

  Query = ENSP00000347289 (Len=522)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000347289, Len=522):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPSALISILQKGLQYVEAEISINKDGTVFDSRPIES 80  
WD40-rpts                                                                                      

Query       81 LSLIVAVIPDVVQMRQQAFGEKLTQQQASAAATEASAMAKAATMTPAAISQQNPPKNREATVNGEENGAHEINNHSKPME 160 
WD40-rpts                                                   (_________________WD 1_____________

Query      161 IDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTS 240 
WD40-rpts      ___)    (_________________WD 2________________)                  (______________

Query      241 LDWNSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAP 320 
WD40-rpts      __WD 3________________)  (_________________WD 4________________)   (____________

Query      321 ALDVDWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAH 400 
WD40-rpts      ____WD 5________________)   (_________________WD 6________________)   (_________

Query      401 SKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWN 480 
WD40-rpts      ____________WD 7_____________________)   (_________________WD 8________________)

Query      481 TQSGSLVHSYQGTGGIFEVCWNARGDKVGASASDGSVCVLDL 522 
WD40-rpts         (________________WD 9________________) 

9 WD40-repeats found in QUERY=ENSP00000347289 (Len=522):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   126-164      6.88  398.68  0.00026        7.5%     19.09
  WD 2:  Seg  4   169-207      8.89  482.01  2.0e-05       32.5%     43.45
  WD 3:  Seg  8   226-263      7.93  442.27  6.8e-05       27.5%     41.23
  WD 4:  Seg 11   266-304      9.50  507.28  9.0e-06       25.0%     52.47
  WD 5:  Seg 15   308-345      6.76  393.70  0.00031       22.5%     52.39
  WD 6:  Seg 19   349-387     10.14  533.66  4.0e-06       35.0%     56.43
  WD 7:  Seg 23   391-438      8.37  460.34  3.9e-05       32.5%     55.38
  WD 8:  Seg 27   442-480     10.71  556.97  1.9e-06       50.0%     55.71
  WD 9:  Seg 31   484-521      7.68  431.81  9.4e-05       22.5%     55.73

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  126-164    -PAAISQQNPPKNREATVNGEENGA---------HEINNHSKPMEIDGD
   WD 2  169-207    -PNKATVLRGHESEVFICAWNPVSD---------LLASGSGDSTARIWN
   WD 3  226-263    REG--GHDVPSNKDVTSLDWNSDGT---------LLAMGSYDGFARIWT
   WD 4  266-304    -GNLASTLGQHKGPIFALKWNKKGN---------YVLSAGVDKTTIIWD
   WD 5  308-345    -GEAKQQFPFHSAPALDVDWQN-NM---------TFASCSTDMCIHVCR
   WD 6  349-387    -DHPVKTFQGHTNEVNAIKWDPSGM---------LLASCSDDMTLKIWS
   WD 7  391-438    -DACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWD
   WD 8  442-480    -GVCTHTLMKHQEPVYSVAFSPDGK---------YLASGSFDKYVHIWN
   WD 9  484-521    -GSLVHSYQGT-GGIFEVCWNARGD---------KVGASASDGSVCVLD

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGK---------RLVSGSEDGTIKVWD