Input parameters:
Query = ENSP00000350071 (Len=797)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000350071, Len=797):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MDELAGGGGGGPGMAAPPRQQQGPGGNLGLSPGGNGAAGGGGPPASEGAGPAAGPELSRPQQYTIPGILHYIQHEWARFE 80
WD40-rpts
Query 81 MERAHWEVERAELQARIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLKYGTELNQGDLKMPTFESEETKDTE 160
WD40-rpts
Query 161 APTAPQNSQLTWKQGRQLLRQYLQEVGYTDTILDVRSQRVRSLLGLSNSEPNGSVETKNLEQILNGGESPKQKGQEIKRS 240
WD40-rpts
Query 241 SGDVLETFNFLENADDSDEDEENDMIEGIPEGKDKHRMNKHKIGNEGLAADLTDDPDTEEALKEFDFLVTAEDGEGAGEA 320
WD40-rpts (_______________
Query 321 RSSGDGTEWDKDDLSPTAEVWDVDQGLISKLKEQYKKERKGKKGVKRANRTKLYDMIADLGDDELPHIPSGIINQSRSAS 400
WD40-rpts _WD 1________________) (______________WD 2_____________)
Query 401 TRMTDHEGARAEEAEPITFPSGGGKSFIMGSDDVLLSVLGLGDLADLTVTNDADYSYDLPANKDAFRKTWNPKYTLRSHF 480
WD40-rpts (__________________WD 3_________________)(________
Query 481 DGVRALAFHPVEPVLVTASEDHTLKLWNLQKTVPAKKSASLDVEPIYTFRAHIGPVLSLAISSNGEQCFSGGIDATIQWW 560
WD40-rpts ________WD 4_______________) (_________________WD 5________________
Query 561 NMPSPSVDPYDTYEPNVLAGTLVGHTDAVWGLAYSGIKNQLLSCSADGTVRLWNPQEKLPCICTYNGDKKHGIPTSVDFI 640
WD40-rpts ) (_________________WD 6________________)(____________________WD 7_
Query 641 GCDPAHMVTSFNTGSAVIYDLETSQSLVILSSQVDSGLQSNNHINRVVSHPTLPVTITAHEDRHIKFFDNKTGKMIHSMV 720
WD40-rpts ___________________) (_________________WD 8________________) (_______
Query 721 AHLDAVTSLAVDPNGIYLMSGSHDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHSSKAYIASAGADALAKVFV 797
WD40-rpts __________WD 9________________) (___________________WD10__________________)
10 WD40-repeats found in QUERY=ENSP00000350071 (Len=797):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 305-342 7.05 405.96 0.00021 20.0% 29.17
WD 2: Seg 3 358-390 2.97 237.19 0.03889 7.5% 6.70
WD 3: Seg 7 431-471 6.55 385.34 0.00040 17.5% 35.88
WD 4: Seg 10 472-508 9.24 496.22 1.3e-05 37.5% 46.37
WD 5: Seg 13 523-561 8.49 465.45 3.3e-05 32.5% 52.21
WD 6: Seg 17 576-614 8.70 474.09 2.5e-05 35.0% 46.06
WD 7: Seg 20 615-660 6.04 364.03 0.00077 22.5% 48.97
WD 8: Seg 25 671-709 6.82 396.58 0.00028 17.5% 43.60
WD 9: Seg 28 713-751 10.06 530.31 4.4e-06 35.0% 54.58
WD10: Seg 32 755-797 6.79 395.23 0.00029 20.0% 51.11
Multiple sequence alignment of 10 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 305-342 --F---DFLVTAE-DG----EGAGEAR---SSGDGTEWDKDDLSPTAEVWD
WD 2 358-390 ----------ERK-GK----KGVKRAN---RTKLYDMIADLGDDELPHIPS
WD 3 431-471 SDD---VLLSVLGLGD----LADLTVT---NDADYSYDLPANKDAFRKTWN
WD 4 472-508 ------PKYTLRS-HF----DGVRALA---FHPVEPVLVTASEDHTLKLWN
WD 5 523-561 -VE---PIYTFRA-HI----GPVLSLA---ISSNGEQCFSGGIDATIQWWN
WD 6 576-614 -NV---LAGTLVG-HT----DAVWGLA---YSGIKNQLLSCSADGTVRLWN
WD 7 615-660 PQEKLPCICTYNG-DK----KHGIPTSVDFIGCDPAHMVTSFNTGSAVIYD
WD 8 671-709 SSQ----VDSGLQ-SN----NHINRVV---SHPTLPVTITAHEDRHIKFFD
WD 9 713-751 -GK---MIHSMVA-HL----DAVTSLA---VDPNGIYLMSGSHDCSIRLWN
WD10 755-797 -KT---CVQEITA-HRKKLDESIYDVA---FHSSKAYIASAGADALAKVFV
WD40 Template TGE---CLRTLSG-HT----SGVTSVS---FSPDGKRLVSGSEDGTIKVWD