Input parameters:
Query = ENSP00000350967 (Len=826)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000350967, Len=826):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTARVNCIQWICKQDGSPSTELVS 80
WD40-rpts (_________________WD 1_________________) (___________________WD 2_________
Query 81 GGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRRTSDPALCTLIVSAAADSAVRLWSKKGPEVMCLQTLNFGNG 160
WD40-rpts __________)(_______________________WD 3_______________________) (___________
Query 161 FALALCLSFLPNTDVPILACGNDDCRIHIFAQQNDQFQKVLSLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWKLYI 240
WD40-rpts ________WD 4__________________) (__________________WD 5_________________)
Query 241 KSTSLETQDDDNIRLKENTFTIENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKDGVLQQPVRLLSASMDKTMILWA 320
WD40-rpts (______________________WD 6_____________________)
Query 321 PDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHAFHGALHLWKQNTVNPREWTPEIVISGHFDGVQDLVWDPEG 400
WD40-rpts (______________________WD 7_____________________) (_______________WD
Query 401 EFIITVGTDQTTRLFAPWKRKDQSQVTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQ 480
WD40-rpts 8______________) (________________WD 9________________) (___________
Query 481 SLNHVLCNQDSDLPEGATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQPSILTEPPTEDHLLQNTLWPEV 560
WD40-rpts _________WD10___________________) (__________________WD11_________________)(___
Query 561 QKLYGHGYEIFCVTCNSSKTLLASACKAAKKEHAAIILWNTTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRDRTWSL 640
WD40-rpts ________________WD12___________________) (_________________WD13_______________
Query 641 WKKQDTISPEFEPVFSLFAFTNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLDVG 720
WD40-rpts _) (_________________WD14________________)(______________________
Query 721 GAVTAVSVCPVLHPSQRYVVAVGLECGKICLYTWKKTDQVPEINDWTHCVETSQSQSHTLAIRKLCWKNCSGKTEQKEAE 800
WD40-rpts ___WD15_________________________)(_______________________________WD16___________
Query 801 GAEWLHFASCGEDHTVKIHRVNKCAL 826
WD40-rpts ___________________)
16 WD40-repeats found in QUERY=ENSP00000350967 (Len=826):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 5-44 5.83 355.37 0.00101 10.0% 53.29
WD 2: Seg 5 48-91 6.78 394.78 0.00030 27.5% 55.92
WD 3: Seg 9 92-143 5.77 352.93 0.00109 22.5% 54.74
WD 4: Seg 13 149-191 5.54 343.42 0.00146 25.0% 54.92
WD 5: Seg 17 197-237 7.22 412.71 0.00017 27.5% 52.65
WD 6: Seg 24 272-320 7.93 442.28 6.8e-05 32.5% 52.15
WD 7: Seg 28 321-369 7.29 415.75 0.00016 22.5% 57.57
WD 8: Seg 32 382-416 7.69 432.49 9.2e-05 22.5% 49.44
WD 9: Seg 35 428-465 5.03 322.56 0.00280 12.5% 47.79
WD10: Seg 39 469-513 4.35 294.18 0.00674 10.0% 41.59
WD11: Seg 42 516-556 3.82 272.35 0.01323 15.0% 21.94
WD12: Seg 46 557-600 6.44 380.73 0.00046 22.5% 54.58
WD13: Seg 50 604-642 9.03 487.78 1.7e-05 32.5% 57.48
WD14: Seg 54 659-697 7.48 423.55 0.00012 30.0% 45.11
WD15: Seg 57 698-753 4.47 299.50 0.00571 22.5% 47.90
WD16: Seg 61 754-820 3.62 264.34 0.01693 17.5% 45.49
Multiple sequence alignment of 16 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 5-44 VLE---------T--------------SHV---FCCPNRVRGVLNWS----S-------------GPR--------G------LLAFG-----TSCSVVLYD
WD 2 48-91 -RV---------V--------------VTN---LNGHTARVNCIQWI----C--------KQDGSPST--------E------LVSGG-----SDNQVIHWE
WD 3 92-143 IED-----NQLLK--------------AVH---LQGHEGPVYAVHAV----Y-------------QRRTSDPALCTL------IVSAA-----ADSAVRLWS
WD 4 149-191 -VM---------C--------------LQT---LNFGNGFALALCLSFLPNT-------------DVP--------I------LACGN-----DDCRIHIFA
WD 5 197-237 -FQ---------K--------------VLS---LCGHEDWIRGVEWA----A-------------FGR------DLF------LASCS-----QDCLIRIWK
WD 6 272-320 AVT---------L--------------ETV---LAGHENWVNAVHWQ----P----VFYKDGVLQQPV--------R------LLSAS-----MDKTMILWA
WD 7 321-369 PDEESGVWLEQVR--------------VGE---VGGNTLGFYDCQFN----E-------------DGS--------M------IIAHA-----FHGALHLWK
WD 8 382-416 ----------------------------IV---ISGHFDGVQDLVWD----P-------------EGE--------F------IITVG-----TDQTTRLFA
WD 9 428-465 -WH---------E--------------IAR---PQIHGYDLKCLAMI----N-------------RFQ---------------FVSGA-----DEKVLRVFS
WD10 469-513 -NF---------V--------------ENF---CAITGQSLNHVLCN----Q-------------DSD--------LPEGATVPALGL-----SNKAVFQGD
WD11 516-556 -SQ---------P--------------SDEEELLTSTGFEYQQVAFQ----P-------------SI---------L------TEPPT-----EDHLLQNTL
WD12 557-600 -WP---------E--------------VQK---LYGHGYEIFCVTCN----S-------------SKT--------L------LASACKAAKKEHAAIILWN
WD13 604-642 -WK---------Q--------------VQN---LVFHSLTVTQMAFS----P-------------NEK--------F------LLAVS-----RDRTWSLWK
WD14 659-697 -AF---------T--------------NKI---TSVHSRIIWSCDWS----P-------------DSK--------Y------FFTGS-----RDKKVVVWG
WD15 698-753 ECD---------S---TDDCIEHNIGPCSS---VLDVGGAVTAVSVC----P--------VLHPSQRY--------V------VAVGL-----ECGKICLYT
WD16 754-820 WKK---------TDQVPEINDWTHCVETSQ---SQSHTLAIRKLCWK----NCSGKTEQKEAEGAEWL--------H------FASCG-----EDHTVKIHR
WD40 Template TGE---------C--------------LRT---LSGHTSGVTSVSFS----P-------------DGK--------R------LVSGS-----EDGTIKVWD