Input parameters:
Query = ENSP00000351147 (Len=495)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000351147, Len=495):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MNKSRWQSRRRHGRRSHQQNPWFRLRDSEDRSDSRAAQPAHDSGHGDDESPSTSSGTAGTSSVPELPGFYFDPEKKRYFR 80
WD40-rpts
Query 81 LLPGHNNCNPLTKESIRQKEMESKRLRLLQEEDRRKKIARMGFNASSMLRKSQLGFLNVTNYCHLAHELRLSCMERKKVQ 160
WD40-rpts (______
Query 161 IRSMDPSALASDRFNLILADTNSDRLFTVNDVKVGGSKYGIINLQSLKTPTLKVFMHENLYFTNRKVNSVCWASLNHLDS 240
WD40-rpts __________WD 1________________) (______
Query 241 HILLCLMGLAETPGCATLLPASLFVNSHPGIDRPGMLCSFRIPGAWSCAWSLNIQANNCFSTGLSRRVLLTNVVTGHRQS 320
WD40-rpts ___________WD 2________________) (________________
Query 321 FGTNSDVLAQQFALMAPLLFNGCRSGEIFAIDLRCGNQGKGWKATRLFHDSAVTSVRILQDEQYLMASDMAGKIKLWDLR 400
WD40-rpts ______WD 3_____________________) (_________________WD 4________________)
Query 401 TTKCVRQYEGHVNEYAYLPLHVHEEEGILVAVGQDCYTRIWSLHDARLLRTIPSPYPASKADIPSVAFSSRLGGSRGAPG 480
WD40-rpts (__________________WD 5_________________) (______________________WD 6________
Query 481 LLMAVGQDLYCYSYS 495
WD40-rpts ______________)
6 WD40-repeats found in QUERY=ENSP00000351147 (Len=495):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 154-191 6.17 369.47 0.00065 10.0% 27.55
WD 2: Seg 7 234-272 3.70 267.69 0.01527 17.5% 9.30
WD 3: Seg 11 304-352 7.33 417.63 0.00015 25.0% 53.68
WD 4: Seg 15 360-398 8.54 467.28 3.1e-05 35.0% 46.98
WD 5: Seg 18 402-442 7.45 422.30 0.00013 20.0% 57.08
WD 6: Seg 22 446-495 4.94 318.88 0.00314 22.5% 43.52
Multiple sequence alignment of 6 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 154-191 --MER---------KKV----QIRSM-DPS--ALASDRFN-------LILADTNS-DRLFTVND
WD 2 234-272 ---SL---------NHL----DSHILLCLM--GLAETPGC-------ATLLPASLFVNSHPGID
WD 3 304-352 LSRRVLLTNVVTGHRQS----FGTNS-DVL--AQQFALMA-------PLLFNGCR-SGEIFAID
WD 4 360-398 -KGWK---------ATR----LFHDS-AVT--SVRILQDE-------QYLMASDM-AGKIKLWD
WD 5 402-442 -TKCV---------RQY----EGHVN-EYAYLPLHVHEEE-------GILVAVGQ-DCYTRIWS
WD 6 446-495 -ARLL---------RTIPSPYPASKA-DIP--SVAFSSRLGGSRGAPGLLMAVGQ-DLYCYSYS
WD40 Template TGECL---------RTL----SGHTS-GVT--SVSFSPDG-------KRLVSGSE-DGTIKVWD