Input parameters:

  Query = ENSP00000352085 (Len=1006)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000352085, Len=1006):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDSSQQKTFRGHDAPVLSLSFDPKDIFLASASCDGSVRVWQISDQTCAISWPLLQKCNDVINAKSICRLAWQPKSGKLLA 80  
WD40-rpts       (_________________WD 1_________________)         (__________________WD 2_______

Query       81 IPVEKSVKLYRRESWSHQFDLSDNFISQTLNIVTWSPCGQYLAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLAWHP 160 
WD40-rpts      __________)   (__________________WD 3_________________)   (_________________WD 4

Query      161 TCGRISYTDAEGNLGLLENVCDPSGKTSSSKVSSRVEKDYNDLFDGDDMSNAGDFLNDNAVEIPSFSKGIINDDEDDEDL 240 
WD40-rpts      _________________)                                                              

Query      241 MMASGRPRQRSHILEDDENSVDISMLKTGSSLLKEEEEDGQEGSIHNLPLVTSQRPFYDGPMPTPRQKPFQSGSTPLHLT 320 
WD40-rpts                                                                                      

Query      321 HRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIHHATHLSNTLNYTIADLSHEAILLACESTDELASKLHCLHFSSWDSSK 400 
WD40-rpts                                                                                      

Query      401 EWIIDLPQNEDIEAICLGQGWAAAATSALLLRLFTIGGVQKEVFSLAGPVVSMAGHGEQLFIVYHRGTGFDGDQCLGVQL 480 
WD40-rpts                                                   (_________________WD 5_____________

Query      481 LELGKKKKQILHGDPLPLTRKSYLAWIGFSAEGTPCYVDSEGIVRMLNRGLGNTWTPICNTREHCKGKSDHYWVVGIHEN 560 
WD40-rpts      ____)      (________________WD 6_______________)                                

Query      561 PQQLRCIPCKGSRFPPTLPRPAVAILSFKLPYCQIATEKGQMEEQFWRSVIFHNHLDYLAKNGYEYEESTKNQATKEQQE 640 
WD40-rpts                                                                                      

Query      641 LLMKMLALSCKLEREFRCVELADLMTQNAVNLAIKYASRSRKLILAQKLSELAVEKAAELTATQVEEEEEEEDFRKKLNA 720 
WD40-rpts                                                                                      

Query      721 GYSNTATEWSQPRFRNQVEEDAEDSGEADDEEKPEIHKPGQNSFSKSTNSSDVSAKSGAVTFSSQGRVNPFKVSASSKEP 800 
WD40-rpts                                                                                      

Query      801 AMSMNSARSTNILDNMGKSSKKSTALSRTTNNEKSPIIKPLIPKPKPKQASAASYFQKRNSQTNKTEEVKEENLKNVLSE 880 
WD40-rpts                                                                                      

Query      881 TPAICPPQNTENQRPKTGFQMWLEENRSNILSDNPDFSDEADIIKEGMIRFRVLSTEERKVWANKAKGETASEGTEAKKR 960 
WD40-rpts                                                                                      

Query      961 KRVVDESDETENQEEKAKENLNLSKKQKPLDFSTNQKLSAFAFKQE 1006
WD40-rpts                                                    

6 WD40-repeats found in QUERY=ENSP00000352085 (Len=1006):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     2-41       8.88  481.46  2.0e-05       37.5%     55.20
  WD 2:  Seg  6    51-91       4.45  298.66  0.00586        7.5%     41.81
  WD 3:  Seg  9    95-135      6.27  373.80  0.00057       32.5%     57.65
  WD 4:  Seg 13   139-178      4.36  294.76  0.00662       10.0%     55.22
  WD 5:  Seg 31   446-485      2.85  232.39  0.04501       10.0%     20.66
  WD 6:  Seg 35   492-528      2.87  233.32  0.04375       20.0%     37.99

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    2-41     DSSQQK-TFRGH--DA-PVLSLSFDPKDIFLASASCDGSVRVWQ
   WD 2   51-91     WPLLQKCNDVIN--AK-SICRLAWQPKSGKLLAIPVEKSVKLYR
   WD 3   95-135    -WSHQF-DLSDNFISQ-TLNIVTWSPCGQYLAAGSINGLIIVWN
   WD 4  139-178    -KDCME-RVKHE--KGYAICGLAWHPTCGRISYTDAEGNLGLLE
   WD 5  446-485    LAGPVV-SMAGH--GE-QLFIVYHRGTGFDGDQCLGVQLLELGK
   WD 6  492-528    HGDPLP-L--TR--KS-YLAWIGFSAEGTPCYVDS-EGIVRMLN

   WD40 Template    TGECLR-TLSGH--TS-GVTSVSFSPDGKRLVSGSEDGTIKVWD