Input parameters:

  Query = ENSP00000353793 (Len=1129)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000353793, Len=1129):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPATRKPMRYGHTEGHTEVCFDDSGSFIVTCGSDGDVRIWEDLDDDDPKFINVGEKAYSCALKSGKLVTAVSNNTIQVHT 80  
WD40-rpts       (_________________WD 1_________________)(_________________WD 2________________)

Query       81 FPEGVPDGILTRFTTNANHVVFNGDGTKIAAGSSDFLVKIVDVMDSSQQKTFRGHDAPVLSLSFDPKDIFLASASCDGSV 160 
WD40-rpts         (_________________WD 3________________)   (_________________WD 4_____________

Query      161 RVWQISDQTCAISWPLLQKCNDVINAKSICRLAWQPKSGKLLAIPVEKSVKLYRRESWSHQFDLSDNFISQTLNIVTWSP 240 
WD40-rpts      ___)         (__________________WD 5_________________)   (__________________WD 6

Query      241 CGQYLAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLAWHPTCGRISYTDAEGNLGLLENVCDPSGKTSSSKVSSRVE 320 
WD40-rpts      _________________)   (_________________WD 7_________________)   (_______________

Query      321 KDYNDLFDGDDMSNAGDFLNDNAVEIPSFSKGIINDDEDDEDLMMASGRPRQRSHILEDDENSVDISMLKTGSSLLKEEE 400 
WD40-rpts      ____WD 8___________________)(_________________WD 9_________________)            

Query      401 EDGQEGSIHNLPLVTSQRPFYDGPMPTPRQKPFQSGSTPLHLTHRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIHHATH 480 
WD40-rpts                                                                                      

Query      481 LSNTLNYTIADLSHEAILLACESTDELASKLHCLHFSSWDSSKEWIIDLPQNEDIEAICLGQGWAAAATSALLLRLFTIG 560 
WD40-rpts                                                                                      

Query      561 GVQKEVFSLAGPVVSMAGHGEQLFIVYHRGTGFDGDQCLGVQLLELGKKKKQILHGDPLPLTRKSYLAWIGFSAEGTPCY 640 
WD40-rpts                                                            (________________WD10_____

Query      641 VDSEGIVRMLNRGLGNTWTPICNTREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFKLPYCQIAT 720 
WD40-rpts      __________)                                                                     

Query      721 EKGQMEEQFWRSVIFHNHLDYLAKNGYEYEESTKNQATKEQQELLMKMLALSCKLEREFRCVELADLMTQNAVNLAIKYA 800 
WD40-rpts                                                                                      

Query      801 SRSRKLILAQKLSELAVEKAAELTATQVEEEEEEEDFRKKLNAGYSNTATEWSQPRFRNQVEEDAEDSGEADDEEKPEIH 880 
WD40-rpts                                                                                      

Query      881 KPGQNSFSKSTNSSDVSAKSGAVTFSSQGRVNPFKVSASSKEPAMSMNSARSTNILDNMGKSSKKSTALSRTTNNEKSPI 960 
WD40-rpts                                                                                      

Query      961 IKPLIPKPKPKQASAASYFQKRNSQTNKTEEVKEENLKNVLSETPAICPPQNTENQRPKTGFQMWLEENRSNILSDNPDF 1040
WD40-rpts                                                                                      

Query     1041 SDEADIIKEGMIRFRVLSTEERKVWANKAKGETASEGTEAKKRKRVVDESDETENQEEKAKENLNLSKKQKPLDFSTNQK 1120
WD40-rpts                                                                                      

Query     1121 LSAFAFKQE 1129
WD40-rpts               

10 WD40-repeats found in QUERY=ENSP00000353793 (Len=1129):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     2-41       7.87  439.69  7.4e-05       30.0%     44.76
  WD 2:  Seg  4    42-80       3.68  266.76  0.01571       17.5%     38.67
  WD 3:  Seg  8    84-122      7.21  412.44  0.00017       30.0%     55.76
  WD 4:  Seg 12   126-164      8.86  480.47  2.1e-05       37.5%     56.95
  WD 5:  Seg 17   174-214      4.84  314.41  0.00360        7.5%     45.60
  WD 6:  Seg 20   218-258      6.68  390.39  0.00034       32.5%     58.58
  WD 7:  Seg 24   262-301      4.73  310.03  0.00412       10.0%     55.50
  WD 8:  Seg 28   305-348      3.44  256.75  0.02138       12.5%     10.85
  WD 9:  Seg 30   349-388      3.12  243.53  0.03206        5.0%     23.60
  WD10:  Seg 49   615-651      2.90  234.47  0.04225       20.0%     36.77

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    2-41     PATRKP-MRYGH--TE-GHTEVCFDD-----SGSFIVTCGSDGDVRIWE
   WD 2   42-80     DLDD-D-DPKFI--NV-GEKAYSCAL-----KSGKLVTAVSNNTIQVHT
   WD 3   84-122    -GVPDG-ILTRF--TT-NANHVVFNG-----DGTKIAAGSSDFLVKIVD
   WD 4  126-164    -SSQQK-TFRGH--DA-PVLSLSFDP-----KDIFLASASCDGSVRVWQ
   WD 5  174-214    WPLLQKCNDVIN--AK-SICRLAWQP-----KSGKLLAIPVEKSVKLYR
   WD 6  218-258    -WSHQF-DLSDNFISQ-TLNIVTWSP-----CGQYLAAGSINGLIIVWN
   WD 7  262-301    -KDCME-RVKHE--KGYAICGLAWHP-----TCGRISYTDAEGNLGLLE
   WD 8  305-348    -DPSGK-TSSSK--VS-SRVEKDYNDLFDGDDMSNAGDFLNDNAVEIPS
   WD 9  349-388    FSKGII-NDDED--DE-DLMMASGRP-----RQRSHILEDDENSVDISM
   WD10  615-651    HGDPLP-L--TR--KS-YLAWIGFSA-----EGTPCYVDS-EGIVRMLN

   WD40 Template    TGECLR-TLSGH--TS-GVTSVSFSP-----DGKRLVSGSEDGTIKVWD