Input parameters:
Query = ENSP00000354078 (Len=905)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000354078, Len=905):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTLTERLREKISRAFYNHGLLCASYPIPIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLN 80
WD40-rpts
Query 81 KRLPPEACLPSAKPVGQPTRYERQLAVRPSTPHTITLQPSSFRNLRLPKRLRVVYFLARTRLAQRLIMAGTVVWIGILVY 160
WD40-rpts
Query 161 TDPAGLRNYLAAQVTEQSPLGEGALAPMPVPSGMLPPSHPDPAFSIFPPDAPKLPENQTSPGESPERGGPAEVVHDSPVP 240
WD40-rpts
Query 241 EVTWGPEDEELWRKLSFRHWPTLFSYYNITLAKRYISLLPVIPVTLRLNPREALEGRHPQDGRSAWPPPGPIPAGHWEAG 320
WD40-rpts
Query 321 PKGPGGVQAHGDVTLYKVAALGLATGIVLVLLLLCLYRVLCPRNYGQLGGGPGRRRRGELPCDDYGYAPPETEIVPLVLR 400
WD40-rpts
Query 401 GHLMDIECLASDGMLLVSCCLAGHVCVWDAQTGDCLTRIPRPGQRRDSGVGSGLEAQESWERLSDGGKAGPEEPGDSPPL 480
WD40-rpts (___________WD 1___________)
Query 481 RHRPRGPPPPSLFGDQPDLTCLIDTNFSAQPRSSQPTQPEPRHRAVCGRSRDSPGYDFSCLVQRVYQEEGLAAVCTPALR 560
WD40-rpts (______________WD 2_____________) (_________________WD
Query 561 PPSPGPVLSQAPEDEGGSPEKGSPSLAWAPSAEGSIWSLELQGNLIVVGRSSGRLEVWDAIEGVLCCSSEEVSSGITALV 640
WD40-rpts 3________________) (______________WD 4______________) (________________W
Query 641 FLDKRIVAARLNGSLDFFSLETHTALSPLQFRGTPGRGSSPASPVYSSSDTVACHLTHTVPCAHQKPITALKAAAGRLVT 720
WD40-rpts D 5_______________) (______________WD 6___
Query 721 GSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYIDQTMVLASGGQDGAICLWDVLTGSRVSHVFAHRGDVTSLTCTTSCVI 800
WD40-rpts __________) (________________WD 7________________) (________________WD 8____
Query 801 SSGLDDLISIWDRSTGIKFYSIQQDLGCGASLGVISDNLLVTGGQGCVSFWDLNYGDLLQTVYLGKNSEAQPARQILVLD 880
WD40-rpts ___________) (________________WD 9_______________) (___________________WD10_
Query 881 NAAIVCNFGSELSLVYVPSVLEKLD 905
WD40-rpts __________________)
10 WD40-repeats found in QUERY=ENSP00000354078 (Len=905):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 9 402-429 4.16 286.31 0.00859 25.0% 38.18
WD 2: Seg 15 505-537 3.11 242.99 0.03259 10.0% -0.60
WD 3: Seg 16 541-579 3.58 262.46 0.01794 7.5% 22.54
WD 4: Seg 19 586-619 5.55 344.12 0.00143 22.5% 45.24
WD 5: Seg 22 623-659 5.81 354.80 0.00103 22.5% 52.40
WD 6: Seg 28 699-731 5.70 349.94 0.00120 30.0% 37.85
WD 7: Seg 31 735-772 8.07 447.84 5.7e-05 40.0% 53.81
WD 8: Seg 35 776-812 6.70 391.39 0.00033 25.0% 52.50
WD 9: Seg 39 816-852 5.02 321.85 0.00286 17.5% 53.07
WD10: Seg 43 856-899 3.56 261.72 0.01835 22.5% 34.41
Multiple sequence alignment of 10 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 402-429 ----------HLMDIECL-----ASDGMLLVS--CCLAGHVCVWD
WD 2 505-537 T-------NFSAQPRSSQP---TQPEPRHRAV--CGRSRDSPGYD
WD 3 541-579 -LVQRVYQEEGLAAVCTPA---LRPPSPGPVL--SQAPEDEGGSP
WD 4 586-619 ----LAWAPSAEGSIWSLE---L--QGNLIVV--GRSSGRLEVWD
WD 5 623-659 -GVLCCSSEEVSSGITALV---FL--DKRIVA--ARLNGSLDFFS
WD 6 699-731 TVPC-----AHQKPITAL-----KAAAGRLVT--GSQDHTLRVFR
WD 7 735-772 -SCCLFTLQGHSGAITTVY---ID-QTMVLAS--GGQDGAICLWD
WD 8 776-812 -GSRVSHVFAHRGDVTSLT---CTTS--CVIS--SGLDDLISIWD
WD 9 816-852 -GIKFYSIQQDLGCGASLG---VISDN--LLV--TGGQGCVSFWD
WD10 856-899 -GDLLQTVYLGKNSEAQPARQILVLDNAAIVCNFGSELSLVYVPS
WD40 Template TGECLRTLSGHTSGVTSVS---FSPDGKRLVS--GSEDGTIKVWD