Input parameters:
Query = ENSP00000356450 (Len=1098)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000356450, Len=1098):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MRKFNIRKVLDGLTAGSSSASQQQQQQHPPGNREPEIQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGA 80
WD40-rpts (________________WD 1____________
Query 81 LRLFGRPGVECYCQHDSGAAVIQLQFLINEGALVSALADDTLHLWNLRQKRPAILHSLKFCRERVTFCHLPFQSKWLYVG 160
WD40-rpts ____) (_________________WD 2________________) (_________________WD 3_______
Query 161 TERGNIHIVNVESFTLSGYVIMWNKAIELSSKSHPGPVVHISDNPMDEGKLLIGFESGTVVLWDLKSKKADYRYTYDEAI 240
WD40-rpts _________) (__________________WD 4_________________) (_____________
Query 241 HSVAWHHEGKQFICSHSDGTLTIWNVRSPAKPVQTITPHGKQLKDGKKPEPCKPILKVEFKTTRSGEPFIILSGGLSYDT 320
WD40-rpts ____WD 5________________)
Query 321 VGRRPCLTVMHGKSTAVLEMDYSIVDFLTLCETPYPNDFQEPYAVVVLLEKDLVLIDLAQNGYPIFENPYPLSIHESPVT 400
WD40-rpts (_________________WD 6_________________)
Query 401 CCEYFADCPVDLIPALYSVGARQKRQGYSKKEWPINGGNWGLGAQSYPEIIITGHADGSVKFWDASAITLQVLYKLKTSK 480
WD40-rpts (____________________WD 7____________________)
Query 481 VFEKSRNKDDRPNTDIVDEDPYAIQIISWCPESRMLCIAGVSAHVIIYRFSKQEVITEVIPMLEVRLLYEINDVETPEGE 560
WD40-rpts (____________________WD 8___________________)
Query 561 QPPPLPTPVGGSNPQPIPPQSHPSTSSSSSDGLRDNVPCLKVKNSPLKQSPGYQTELVIQLVWVGGEPPQQITSLAVNSS 640
WD40-rpts (______________WD
Query 641 YGLVVFGNCNGIAMVDYLQKAVLLNLGTIELYGSNDPYRREPRSPRKSRQPSGAGLCDISEGTVVPEDRCKSPTSDVKDN 720
WD40-rpts 9______________)
Query 721 SFSRSRSSSVTSIDKESREAISALHFCETFTRKTDSSPSPCLWVGTTLGTVLVIALNLPPGGEQRLLQPVIVSPSGTILR 800
WD40-rpts (_________________WD10_____
Query 801 LKGAILRMAFLDTTGCLIPPAYEPWREHNVPEEKDEKEKLKKRRPVSVSPSSSQEISENQYAVICSEKQAKVISLPTQNC 880
WD40-rpts ___________)
Query 881 AYKQNITETSFVLRGDIVALSNSICLACFCANGHIMTFSLPSLRPLLDVYYLPLTNMRIARTFCFTNNGQALYLVSPTEI 960
WD40-rpts
Query 961 QRLTYSQETCENLQEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGA 1040
WD40-rpts
Query 1041 ASGVVGELARARLALDERGQKLGDLEERTAAMLSSAESFSKHAHEIMLKYKDKKWYQF 1098
WD40-rpts
10 WD40-repeats found in QUERY=ENSP00000356450 (Len=1098):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 48-85 6.20 370.73 0.00063 20.0% 43.11
WD 2: Seg 5 88-126 6.45 381.09 0.00045 22.5% 56.30
WD 3: Seg 9 132-170 6.02 363.48 0.00079 25.0% 55.58
WD 4: Seg 14 184-224 7.31 416.66 0.00015 30.0% 48.10
WD 5: Seg 17 227-265 6.84 397.05 0.00028 20.0% 54.83
WD 6: Seg 27 340-379 4.36 294.70 0.00663 7.5% 16.64
WD 7: Seg 34 419-464 5.61 346.41 0.00133 20.0% 38.40
WD 8: Seg 40 485-529 4.47 299.41 0.00573 7.5% 45.04
WD 9: Seg 45 624-657 3.47 258.13 0.02049 17.5% 45.91
WD10: Seg 51 774-812 3.10 242.87 0.03271 17.5% 19.00
Multiple sequence alignment of 10 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 48-85 --L------CKTVRHGFPYQPSALAFDP-VQKILAVGTQTGALRLFG
WD 2 88-126 -GV------ECYCQHDSGAAVIQLQFLI-NEGALVSALADDTLHLWN
WD 3 132-170 -PA------ILHSLKFCRERVTFCHLPF-QSKWLYVGTERGNIHIVN
WD 4 184-224 NKA------IELSSKSHPGPVVHISDNPMDEGKLLIGFESGTVVLWD
WD 5 227-265 -SK------KADYRYTYDEAIHSVAWHH-EGKQFICSHSDGTLTIWN
WD 6 340-379 MDY------SIVDFLTLCETPYPNDFQE-PYAVVVLLEKDLVLIDLA
WD 7 419-464 VGARQKRQGYSKKEWPINGGNWGLGAQS-YPEIIITGHADGSVKFWD
WD 8 485-529 SRN-KDDRPNTDIVDEDPYAIQIISWCP-ESRMLCIAGVSAHVIIYR
WD 9 624-657 VG------------GEPPQQITSLAVNS-SYGLVVFGNCNGIAMVDY
WD10 774-812 -IA------LNLPPGGEQRLLQPVIVSP-SGTILRLKGAILRMAFLD
WD40 Template TGE------CLRTLSGHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD