Input parameters:
Query = ENSP00000357053 (Len=597)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000357053, Len=597):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MSSKGSSTDGRTDLANGSLSSSPEEMSGAEEGRETSSGIEVEASDLSLSLTGDDGGPNRTSTESRGTDTESSGEDKDSDS 80
WD40-rpts (_________________WD 1_________________) (_____________WD 2____________
Query 81 MEDTGHYSINDENRVHDRSEEEEEEEEEEEEEQPRRRVQRKRANRDQDSSDDERALEDWVSSETSALPRPRWQALPALRE 160
WD40-rpts _) (_______________
Query 161 RELGSSARFVYEACGARVFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNVF 240
WD40-rpts __WD 3________________)(________________WD 4________________) (______________
Query 241 QAKFLPNSGDSTLAMCARDGQVRVAELSATQCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPAS 320
WD40-rpts ____WD 5_________________) (_________________WD 6_________________)(_______
Query 321 KLVVTKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDENENNGVLKKFCPHHLVNSESKANITCLVYSHDGT 400
WD40-rpts ______________WD 7_____________________) (_________________WD 8__
Query 401 ELLASYNDEDIYLFNSSHSDGAQYVKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGV 480
WD40-rpts ______________) (__________________WD 9__________________) (_____________
Query 481 VNCLEPHPHLPVLATSGLDHDVKIWAPTAEASTELTGLKDVIKKNKRERDEDSLHQTDLFDSHMLWFLMHHLRQRRHHRR 560
WD40-rpts ____WD10_________________) (_________________WD11________________)
Query 561 WREPGVGATDADSDESPSSSDTSDEEEGPDRVQCMPS 597
WD40-rpts
11 WD40-repeats found in QUERY=ENSP00000357053 (Len=597):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-40 6.92 400.43 0.00025 10.0% -14.18
WD 2: Seg 2 51-82 4.43 297.72 0.00604 20.0% -6.13
WD 3: Seg 4 145-183 4.00 279.77 0.01052 2.5% 30.70
WD 4: Seg 7 184-221 9.42 503.68 1.0e-05 37.5% 49.80
WD 5: Seg 11 226-266 7.37 419.00 0.00014 30.0% 51.27
WD 6: Seg 15 273-312 6.83 396.66 0.00028 17.5% 53.32
WD 7: Seg 19 313-360 6.11 367.13 0.00070 12.5% 50.90
WD 8: Seg 24 377-415 8.12 449.90 5.4e-05 22.5% 48.03
WD 9: Seg 27 422-463 6.86 397.85 0.00027 32.5% 53.23
WD10: Seg 31 467-506 7.25 414.30 0.00016 20.0% 52.36
WD11: Seg 35 509-547 7.72 433.55 8.9e-05 15.0% 46.93
Multiple sequence alignment of 11 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-40 MSS-------KGSSTDGRTDL--ANGSLS-SS-PE--E-MSGAEEGRETSSGIE
WD 2 51-82 TG---------------DDGG--PNRTST-ES-RG--T-DTESSGEDKDSDSME
WD 3 145-183 -SA-------LPRPRWQALPA--LREREL-GS-SA--R-FVYEACGARVFVQRF
WD 4 184-221 --R-------LQHGLEGHTGC--VNTLHF-NQ-RG--T-WLASGSDDLKVVVWD
WD 5 226-266 -QP-------VLDFESGHKSN--VFQAKF-LP-NSGDS-TLAMCARDGQVRVAE
WD 6 273-312 -CK-------NTKRVAQHKGA--SHKLAL-EP-DS--PCTFLSAGEDAVVFTID
WD 7 313-360 LRQDRPASKLVVTKEKEKKVG--LYTIYV-NPANT--H-QFAVGGRDQFVRIYD
WD 8 377-415 CPH-------HL-VNSESKAN--ITCLVY-SH-DG--T-ELLASYNDEDIYLFN
WD 9 422-463 -AQ-------YVKRYKGHRNNATVKGVNFYGP-KS--E-FVVSGSDCGHIFLWE
WD10 467-506 -CQ-------IIQFMEGDKGG-VVNCLEP-HP-HL--P-VLATSGLDHDVKIWA
WD11 509-547 -AE-------ASTELTGLKDV--IKKNKR-ER-DE--D-SLHQTDLFDSHMLWF
WD40 Template TGE-------CLRTLSGHTSG--VTSVSF-SP-DG--K-RLVSGSEDGTIKVWD