Input parameters:

  Query = ENSP00000365543 (Len=371)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000365543, Len=371):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEMLHRSNLLALVGGGSSPKFSEISVL 80  
WD40-rpts      (______________WD 1_____________)(______________________WD 2____________________

Query       81 IWDDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIVIVLKNRIYVYSFPDNPRKLFEFDTRDNPKAAHPTPHLHTLGLCD 160 
WD40-rpts      __)                                                        (____________________

Query      161 LCPSLEKQLLVFPGHKCGSLQLVDLASTKPGTSSAPFTINAHQSDIACVSLNQPGTVVASASQKGTLIRLFDTQSKEKLV 240 
WD40-rpts      WD 3___________________)        (_________________WD 4_________________)   (____

Query      241 ELRRGTDPATLYCINFSHDSSFLCASSDKGTVHIFALKDTRLNRRSALARVGKVGPMIGQYVDSQWSLASFTVPAESACI 320 
WD40-rpts      ______________WD 5_________________)                                            

Query      321 CAFGRNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDDDF 371 
WD40-rpts               (________________WD 6________________)    

6 WD40-repeats found in QUERY=ENSP00000365543 (Len=371):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-33       3.94  277.62  0.01124       20.0%     41.87
  WD 2:  Seg  4    34-83       3.77  270.50  0.01400       12.5%     53.14
  WD 3:  Seg 13   140-184      6.24  372.59  0.00059       27.5%     30.15
  WD 4:  Seg 16   193-232      7.03  404.95  0.00022       30.0%     50.49
  WD 5:  Seg 20   236-276      6.56  385.52  0.00040       27.5%     56.18
  WD 6:  Seg 26   330-367      2.98  237.63  0.03837       15.0%     34.81

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-33     -------------MTQQPL--RGVTSLRFNQDQSCFC-CAMETG---------VRIYN
   WD 2   34-83     VEPLME----KGHLDHEQV--GSMGLVEMLHRSNLLA-LVGGGSSPKFSEIS-VLIWD
   WD 3  140-184    TR---DNPKAAHPTPHLHT--LGLCDLCPSLEKQLLVFPGHKCG-------S-LQLVD
   WD 4  193-232    -S---S----APFTINAHQ--SDIACVSLNQPGTVVA-SASQKG-------TLIRLFD
   WD 5  236-276    -K---E----KLVELRRGTDPATLYCINFSHDSSFLC-ASSDKG-------T-VHIFA
   WD 6  330-367    -N---V----NSVIAICVD--GTFHKYVFTPDGNCNR-EAF-DV-------Y-LDICD

   WD40 Template    TG---E----CLRTLSGHT--SGVTSVSFSPDGKRLV-SGSEDG-------T-IKVWD