Input parameters:

  Query = ENSP00000373246 (Len=1003)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000373246, Len=1003):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSQFEMDTYAKSHDLMSGFWNACYDMLMSSGQRRQWERAQSRRAFQELVLEPAQRRARLEGLRYTAVLKQQATQHSMALL 80  
WD40-rpts                                                                                      

Query       81 HWGALWRQLASPCGAWALRDTPIPRWKLSSAETYSRMRLKLVPNHHFDPHLEASALRDNLGEVPLTPTEEASLPLAVTKE 160 
WD40-rpts                                                                                      

Query      161 AKVSTPPELLQEDQLGEDELAELETPMEAAELDEQREKLVLSAECQLVTVVAVVPGLLEVTTQNVYFYDGSTERVETEEG 240 
WD40-rpts                                                                                      

Query      241 IGYDFRRPLAQLREVHLRRFNLRRSALELFFIDQANYFLNFPCKVGTTPVSSPSQTPRPQPGPIPPHTQVRNQVYSWLLR 320 
WD40-rpts                                                                                      

Query      321 LRPPSQGYLSSRSPQEMLRASGLTQKWVQREISNFEYLMQLNTIAGRTYNDLSQYPVFPWVLQDYVSPTLDLSNPAVFRD 400 
WD40-rpts                                                                                      

Query      401 LSKPIGVVNPKHAQLVREKYESFEDPAGTIDKFHYGTHYSNAAGVMHYLIRVEPFTSLHVQLQSGRFDCSDRQFHSVAAA 480 
WD40-rpts                                                                                      

Query      481 WQARLESPADVKELIPEFFYFPDFLENQNGFDLGCLQLTNEKVGDVVLPPWASSPEDFIQQHRQALESEYVSAHLHEWID 560 
WD40-rpts                                                                                      

Query      561 LIFGYKQRGPAAEEALNVFYYCTYEGAVDLDHVTDERERKALEGIISNFGQTPCQLLKEPHPTRLSAEEAAHRLARLDTN 640 
WD40-rpts                                                                                      

Query      641 SPSIFQHLDELKAFFAEVTVSASGLLGTHSWLPYDRNISNYFSFSKDPTMGSHKTQRLLSGPWVPGSGVSGQALAVAPDG 720 
WD40-rpts                                                            (___________________WD 1__

Query      721 KLLFSGGHWDGSLRVTALPRGKLLSQLSCHLDVVTCLALDTCGIYLISGSRDTTCMVWRLLHQGGLSVGLAPKPVQVLYG 800 
WD40-rpts      ________________)   (_________________WD 2________________)            (________

Query      801 HGAAVSCVAISTELDMAVSGSEDGTVIIHTVRRGQFVAALRPLGATFPGPIFHLALGSEGQIVVQSSAWERPGAQVTYSL 880 
WD40-rpts      _________WD 3________________)                                                  

Query      881 HLYSVNGKLRASLPLAEQPTALTVTEDFVLLGTAQCALHILQLNTLLPAAPPLPMKVAIRSVAVTKERSHVLVGLEDGKL 960 
WD40-rpts                                                (__________________WD 4_______________

Query      961 IVVVAGQPSEVRSSQFARKLWRSSRRISQVSSGETEYNPTEAR 1003
WD40-rpts      ___)                                       

4 WD40-repeats found in QUERY=ENSP00000373246 (Len=1003):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 14   695-737      2.89  234.22  0.04256       32.5%     41.34
  WD 2:  Seg 17   741-779      6.94  401.47  0.00024       40.0%     55.56
  WD 3:  Seg 21   792-830      5.55  344.05  0.00144       35.0%     55.43
  WD 4:  Seg 33   923-964      4.03  281.25  0.01005       20.0%     43.39

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  695-737    TQRLL--SGPWVPGSGVSGQALAVAPDGKLLFSGGHWDGSLRVTA
   WD 2  741-779    -GKLL--S--QLSCHLDVVTCLALDTCGIYLISGSR-DTTCMVWR
   WD 3  792-830    -PKPV--Q--VLYGHGAAVSCVAISTELDMAVSGSE-DGTVIIHT
   WD 4  923-964    LNTLLPAA--PPLPMKVAIRSVAVTKERSHVLVGLE-DGKLIVVV

   WD40 Template    TGECL--R--TLSGHTSGVTSVSFSPDGKRLVSGSE-DGTIKVWD