Input parameters:

  Query = ENSP00000378254 (Len=896)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000378254, Len=896):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDGAAGPGDGPAREALQSLSQRLRVQEQEMELVKAALAEALRLLRLQVPPSSLQGSGTPAPPGDSLAAPPGLPPTCTPSL 80  
WD40-rpts                                                                                      

Query       81 VSRGTQTETEVELKSSPGPPGLSNGPPAPQGASEEPSGTQSEGGGSSSSGAGSPGPPGILRPLQPPQRADTPRRNSSSSS 160 
WD40-rpts                                                                                      

Query      161 SPSERPRQKLSRKAISSANLLVRSGSTESRGGKDPLSSPGGPGSRRSNYNLEGISVKMFLRGRPITMYIPSGIRSLEELP 240 
WD40-rpts                                                                          (___________

Query      241 SGPPPETLSLDWVYGYRGRDSRSNLFVLRSGEVVYFIACVVVLYRPGGGPGGPGGGGQRHYRGHTDCVRCLAVHPDGVRV 320 
WD40-rpts      ______WD 1________________)                           (______________________WD 

Query      321 ASGQTAGVDKDGKPLQPVVHIWDSETLLKLQEIGLGAFERGVGALAFSAADQGAFLCVVDDSNEHMLSVWDCSRGMKLAE 400 
WD40-rpts      2_____________________)(_____________________WD 3_____________________)   (_____

Query      401 IKSTNDSVLAVGFNPRDSSCIVTSGKSHVHFWNWSGGVGVPGNGTLTRKQGVFGKYKKPKFIPCFVFLPDGDILTGDSEG 480 
WD40-rpts      ____________WD 4________________)(________________________WD 5__________________

Query      481 NILTWGRSPSDSKTPGRGGAKETYGIVAQAHAHEGSIFALCLRRDGTVLSGGGRDRRLVQWGPGLVALQEAEIPEHFGAV 560 
WD40-rpts      _____)                 (_________________WD 6________________)(_________________

Query      561 RAIAEGLGSELLVGTTKNALLRGDLAQGFSPVIQGHTDELWGLCTHPSQNRFLTCGHDRQLCLWDGESHALAWSIDLKET 640 
WD40-rpts      _WD 7__________________)(__________________WD 8_________________)  (____________

Query      641 GLCADFHPSGAVVAVGLNTGRWLVLDTETREIVSDVIDGNEQLSVVRYSPDGLYLAIGSHDNVIYIYSVSSDGAKSSRFG 720 
WD40-rpts      _____WD 9________________)   (_________________WD10________________)       (____

Query      721 RCMGHSSFITHLDWSKDGNFIMSNSGDYEILYWDVAGGCKQLKNRYESRDREWATYTCVLGFHVYGVWPDGSDGTDINSL 800 
WD40-rpts      _____________WD11________________)                          (__________________W

Query      801 CRSHNERVVAVADDFCKVHLFQYPCARAKAPSRMYGGHGSHVTSVRFTHDDSHLVSLGGKDASIFQWRVLGAGGAGPAPA 880 
WD40-rpts      D12__________________)      (_________________WD13_________________)            

Query      881 TPSRTPSLSPASSLDV 896 
WD40-rpts                      

13 WD40-repeats found in QUERY=ENSP00000378254 (Len=896):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4   229-267      5.43  338.92  0.00168       20.0%     14.16
  WD 2:  Seg  8   295-343      6.87  398.61  0.00026       37.5%     49.85
  WD 3:  Seg 12   344-391      6.41  379.45  0.00048       27.5%     42.69
  WD 4:  Seg 16   395-433      8.10  449.32  5.5e-05       20.0%     58.58
  WD 5:  Seg 20   434-486      5.22  330.27  0.00220       22.5%     45.97
  WD 6:  Seg 23   504-542      7.02  404.50  0.00022       17.5%     50.89
  WD 7:  Seg 27   543-584      4.97  320.10  0.00302       15.0%     56.22
  WD 8:  Seg 31   585-625      7.98  444.43  6.4e-05       20.0%     54.29
  WD 9:  Seg 35   628-666      5.65  347.92  0.00127       20.0%     56.19
  WD10:  Seg 39   670-708      8.64  471.37  2.8e-05       27.5%     58.13
  WD11:  Seg 43   716-754      8.41  462.03  3.7e-05       32.5%     51.60
  WD12:  Seg 49   781-822      5.93  359.45  0.00089        5.0%     47.25
  WD13:  Seg 53   829-868      7.41  420.77  0.00013       42.5%     44.18

Multiple sequence alignment of 13 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  229-267    IP--------------S-G--IR----SLEELPSGPPPETLSLDWVY----GYR-GR-DS----------RSNLFV
   WD 2  295-343    -G--------------G-G--QR----HYRGHTDCVRCLAVHPDGVR----VAS-GQTAGVDKDGKPLQPVVHIWD
   WD 3  344-391    SE--------------T-L--LKLQEIGLGAFERGVGALAFSAADQGAFLCVVD-DSNEH----------MLSVWD
   WD 4  395-433    -G--------------M-K--LA----EIKSTNDSVLAVGFNPRDSS----CIV-TSGKS----------HVHFWN
   WD 5  434-486    WSGGVGVPGNGTLTRKQ-G--VF----GKYKKPKFIPCFVFLPDGDI----L-T-GDSEG----------NILTWG
   WD 6  504-542    -Y--------------G-I--VA----QAHAHEGSIFALCLRRDGTV----LSG-GGRDR----------RLVQWG
   WD 7  543-584    PG-----------LVAL-Q--EA----EIPEHFGAVRAIAEGLGSEL----LVG-TT-KN----------ALLRGD
   WD 8  585-625    LA--------------QGF--SP----VIQGHTDELWGLCTHPSQNR----FLT-CGHDR----------QLCLWD
   WD 9  628-666    -S--------------H-A--LA----WSIDLKETGLCADFHPSGAV----VAV-GLNTG----------RWLVLD
   WD10  670-708    -R--------------E-I--VS----DVIDGNEQLSVVRYSPDGLY----LAI-GSHDN----------VIYIYS
   WD11  716-754    -S--------------S-R--FG----RCMGHSSFITHLDWSKDGNF----IMS-NSGDY----------EILYWD
   WD12  781-822    GF--------------H-VYGVW----PDGSDGTDINSLCRSHNERV----VAV-ADDFC----------KVHLFQ
   WD13  829-868    -K--------------A-P--SR----MYGGHGSHVTSVRFTHDDSH----LVSLGGKDA----------SIFQWR

   WD40 Template    TG--------------E-C--LR----TLSGHTSGVTSVSFSPDGKR----LVS-GSEDG----------TIKVWD