Input parameters:

  Query = ENSP00000378857 (Len=1151)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000378857, Len=1151):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGSAARWEGSFSREFSSLLSRGCLSTSRIDMDALEDYVWPRATSELILLPVTGLECVGDRLLAGEGPDVLVYSLDFGGHL 80  
WD40-rpts                                                                                      

Query       81 RMIKRVQNLLGHYLIHGFRVRPEPNGDLDLEAMVAVFGSKGLRVVKISWGQGHFWELWRSGLWNMSDWIWDARWLEGNIA 160 
WD40-rpts                                                      (___________________WD 1________

Query      161 LALGHNSVVLYDPVVGCILQEVPCTDRCTLSSACLIGDAWKELTIVAGAVSNQLLVWYPATALADNKPVAPDRRISGHVG 240 
WD40-rpts      ___________)   (___________________WD 2__________________)          (___________

Query      241 IIFSMSYLESKGLLATASEDRSVRIWKVGDLRVPGGRVQNIGHCFGHSARVWQVKLLENYLISAGEDCVCLVWSHEGEIL 320 
WD40-rpts      ______WD 3________________)(_____________________WD 4____________________)  (___

Query      321 QAFRGHQGRGIRAIAAHERQAWVITGGDDSGIRLWHLVGRGYRGLGVSALCFKSRSRPGTLKAVTLAGSWRLLAVTDTGA 400 
WD40-rpts      ______________WD 5_________________)           (________________WD 6____________

Query      401 LYLYDVEVKCWEQLLEDKHFQSYCLLEAAPGPEGFGLCAMANGEGRVKVVPINTPTAAVDQTLFPGKVHSLSWALRGYEE 480 
WD40-rpts      ____)      (_________________WD 7_________________)   (__________________WD 8___

Query      481 LLLLASGPGGVVACLEISAAPSGKAIFVKERCRYLLPPSKQRWHTCSAFLPPGDFLVCGDRRGSVLLFPSRPGLLKDPGV 560 
WD40-rpts      _______________)              (_________________WD 9________________) (_________

Query      561 GGKARAGAGAPVVGSGSSGGGNAFTGLGPVSTLPSLHGKQGVTSVTCHGGYVYTTGRDGAYYQLFVRDGQLQPVLRQKSC 640 
WD40-rpts      ________WD10________________)(_______________WD11_______________)   (___________

Query      641 RGMNWLAGLRIVPDGSMVILGFHANEFVVWNPRSHEKLHIVNCGGGHRSWAFSDTEAAMAFAYLKDGDVMLYRALGGCTR 720 
WD40-rpts      ________WD12__________________)                                     (___________

Query      721 PHVILREGLHGREITCVKRVGTITLGPEYGVPSFMQPDDLEPGSEGPDLTDIVITCSEDTTVCVLALPTTTGSAHALTAV 800 
WD40-rpts      ______WD13________________)(_________________WD14________________)       (______

Query      801 CNHISSVRAVAVWGIGTPGGPQDPQPGLTAHVVSAGGRAEMHCFSIMVTPDPSTPSRLACHVMHLSSHRLDEYWDRQRNR 880 
WD40-rpts      ___________WD15________________)                                                

Query      881 HRMVKVDPETRYMSLAVCELDQPGLGPLVAAACSDGAVRLFLLQDSGRILQLLAETFHHKRCVLKVHSFTHEAPNQRRRL 960 
WD40-rpts            (_______________WD16_______________)  (_______________________WD17________

Query      961 LLCSAATDGSLAFWDLTTMLDHDSTVLEPPVDPGLPYRLGTPSLTLQAHSCGINSLHTLPTREGHHLVASGSEDGSLHVF 1040
WD40-rpts      ______________)                        (__________________WD18__________________

Query     1041 VLAVEMLQLEEAVGEAGLVPQLRVLEEYSVPCAHAAHVTGLKILSPSIMVSASIDQRLTFWRLGHGEPTFMNSTVFHVPD 1120
WD40-rpts      )                       (________________WD19________________)                  

Query     1121 VADMDCWPVSPEFGHRCALGGQGLEVYNWYD 1151
WD40-rpts                                     

19 WD40-repeats found in QUERY=ENSP00000378857 (Len=1151):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 10   129-172      4.21  288.56  0.00802       12.5%     45.15
  WD 2:  Seg 14   176-218      5.53  343.11  0.00148       17.5%     48.45
  WD 3:  Seg 18   229-267      8.48  465.13  3.3e-05       27.5%     51.66
  WD 4:  Seg 22   268-314      6.09  366.21  0.00072       27.5%     54.98
  WD 5:  Seg 26   317-356      7.79  436.34  8.2e-05       25.0%     59.30
  WD 6:  Seg 30   368-405      4.66  307.03  0.00453       12.5%     54.33
  WD 7:  Seg 34   412-451      5.59  345.72  0.00136       17.5%     47.45
  WD 8:  Seg 38   455-496      5.09  324.84  0.00261       15.0%     48.80
  WD 9:  Seg 42   511-549      6.58  386.40  0.00039       20.0%     46.68
  WD10:  Seg 45   551-589      5.63  347.32  0.00130       12.5%     16.98
  WD11:  Seg 49   590-625      5.73  351.22  0.00115       15.0%     45.70
  WD12:  Seg 53   629-671      6.40  379.04  0.00048       20.0%     55.76
  WD13:  Seg 60   709-747      5.94  360.14  0.00087       20.0%     43.25
  WD14:  Seg 64   748-786      6.60  387.38  0.00037       12.5%     22.41
  WD15:  Seg 66   794-832      6.51  383.56  0.00042       15.0%     28.38
  WD16:  Seg 72   887-922      5.89  357.91  0.00093       12.5%     35.04
  WD17:  Seg 75   925-975      6.66  389.80  0.00035       22.5%     36.63
  WD18:  Seg 78  1000-1041     5.17  328.09  0.00236       35.0%     45.49
  WD19:  Seg 84  1065-1102     6.14  368.39  0.00067       22.5%     45.69

Multiple sequence alignment of 19 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  129-172    WG---------QGHFWELWRSGLWNMS-----------D-WIWD----ARWLEGNI---AL-ALG--HNSVVLYD
   WD 2  176-218    -G---------C------ILQEVPCTD-----------R-CTLSSACLIGDAWKEL---TI-VAGAVSNQLLVWY
   WD 3  229-267    -V---------A------PDRRISGHV-----------G-IIFS----MSYLESKG---LL-ATASEDRSVRIWK
   WD 4  268-314    VGDLRVPGGRVQ------NIGHCFGHS-----------A-RVWQ----VKLLEN-----YL-ISAGEDCVCLVWS
   WD 5  317-356    -G---------E------ILQAFRGHQ-----------GRGIRA----IAAHERQA---WV-ITGGDDSGIRLWH
   WD 6  368-405    -S---------A------LCFKSRSRP-----------G-TLKA----VTLAGSW----RL-LAVTDTGALYLYD
   WD 7  412-451    -E---------Q------LLEDKHFQS-----------Y-CLLE----AAPGPEGF---GLCAMANGEGRVKVVP
   WD 8  455-496    -P---------T------AAVDQTLFP-----------G-KVHS----LSWALRGYEELLL-LASGPGGVVACLE
   WD 9  511-549    -R---------C------RYLLPPSKQ-----------R-WHTC----SAFLPPGD---FL-VCGDRRGSVLLFP
   WD10  551-589    -R---------P------GLLKDPGVG-----------G-KARA----GAGAPVVG---SG-SSGGGNAFTGLGP
   WD11  590-625    -------------------VSTLPSLH-----------G-KQGV----TSVTCHGG---YV-YTTGRDGAYYQLF
   WD12  629-671    -G---------Q------LQPVLRQKS-------CRGMN-WLAG----LRIVPDGS---MV-ILGFHANEFVVWN
   WD13  709-747    -V---------M------LYRALGGCT-----------R-PHVI----LREGLHGR---EI-TCVKRVGTITLGP
   WD14  748-786    -E---------Y------GVPSFMQPD-----------D-LEPG----SEGPDLTD---IV-ITCSEDTTVCVLA
   WD15  794-832    -A---------H------ALTAVCNHI-----------S-SVRA----VAVWGIGT---PG-GPQDPQPGLTAHV
   WD16  887-922    DP---------E----------TRYMS-----------L-AVCE----LDQPGLGP---LV-AAACSDGAVRLFL
   WD17  925-975    DS---------G------RILQLLAETFHHKRCVLKVHS-FTHE----APNQRRRL---LL-CSAATDGSLAFWD
   WD18 1000-1041   -G---------T------PSLTLQAHS-----------C-GINS----LHTLPTREGHHLV-ASGSEDGSLHVFV
   WD19 1065-1102   -L---------E------EYSVPCAHA-----------A-HVTG----LKIL-SPS---IM-VSASIDQRLTFWR

   WD40 Template    TG---------E------CLRTLSGHT-----------S-GVTS----VSFSPDGK---RL-VSGSEDGTIKVWD