Input parameters:
Query = ENSP00000383366 (Len=404)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000383366, Len=404):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 XIESGSRLMSSEDLAEIPQLQKLSIPHGFQNKEAASSPTPSITLSQVPDLQPGSQLFTEIHLAKIEKMFEEDINSTGALG 80
WD40-rpts
Query 81 MDAFIKAMKKVLSSVSDEMLKELFLKVDSDCEGFVTWQKYVDYMMREFQGKEDMRKSQYRLHFYLPMTVVPLNHGCEVVK 160
WD40-rpts (___________
Query 161 VVFLIHRFKKIGCFLTVTKDGILQFWSESFSLMSSFRLNQTQQLYNQPMWVIDMVCLHNMNLVAVASTRQKIDFFDISDH 240
WD40-rpts ______WD 1________________) (_______________WD 2_______________)
Query 241 KCVRAFTFVDLDSCALVMDYWSDYHRGVFCYGDAKGNVIVFTSENMTSGLFNPRILPRASKWDHWIKVSLQKLLNEKSAL 320
WD40-rpts
Query 321 HRSYRLKALHPNWCEQVKFIPQMNVVVSCSAIEKSSLVLTILPAKASKKPRLSVLRLRKGILCFDYCPDRNFLVTGGYDA 400
WD40-rpts (_________________WD 3________________) (__________________WD 4_______________
Query 401 FIRL 404
WD40-rpts ___)
4 WD40-repeats found in QUERY=ENSP00000383366 (Len=404):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 149-187 5.11 325.93 0.00252 12.5% 33.14
WD 2: Seg 5 201-236 5.56 344.53 0.00141 12.5% 44.23
WD 3: Seg 13 321-359 6.16 369.28 0.00066 20.0% 44.26
WD 4: Seg 17 363-404 3.79 271.38 0.01363 20.0% 27.46
Multiple sequence alignment of 4 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 149-187 -VVPLNHGC----EVVKVVFLIHRFKKIGCFLTVTKDGILQFWS
WD 2 201-236 ----TQQLY----NQPMWVIDMVCLHNMNLVAVASTRQKIDFFD
WD 3 321-359 -HRSYRLKA----LHPNWCEQVKFIPQMNVVVSCSAIEKSSLVL
WD 4 363-404 PAKASKKPRLSVLRLRKGILCFDYCPDRNFLVTGGYDAFIRL--
WD40 Template TGECLRTLS----GHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD