Input parameters:

  Query = ENSP00000384565 (Len=283)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000384565, Len=283):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 PPCSLISDCCAGNQRDSVGVGPSEPGCYPCPGPNMNPIALGSRWLAYAENKLIRCHQSRGGACGDNIQSYTATVISAAKT 80  
WD40-rpts                                                                  (__________________W

Query       81 LKSGLTMVGKVVTQLTGTLPSGVTEDDVAIHSNSRRSPLVPGIITVIDTETVGEGQVLVSEDSDSDGIVAHFPAHEKPVC 160 
WD40-rpts      D 1_________________)     (_______________WD 2_______________)   (______________

Query      161 CMAFNTSGMLLVTTDTLGHDFHVFQILTHPWSSSQCAVHHLYTLHRGETEAKVQDICFSHDCRWVVVSTLRGTSHVFPIN 240 
WD40-rpts      ___WD 3_________________)   (______________________WD 4______________________)  

Query      241 PYGGQPCVRTHMSPRVVNRMSRFQKSAGLEEIEQELTSKQGGR 283 
WD40-rpts                                                 

4 WD40-repeats found in QUERY=ENSP00000384565 (Len=283):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    61-101      4.86  315.26  0.00351       15.0%      6.90
  WD 2:  Seg  5   107-142      3.33  252.08  0.02467       12.5%      3.40
  WD 3:  Seg  7   146-185      6.98  403.06  0.00023       20.0%     53.16
  WD 4:  Seg 11   189-238      5.68  349.34  0.00122       20.0%     40.87

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   61-101    GACGDNIQS-----------YTATVISAAKTLKSGLTMVGKVVTQLT-GTLPS
   WD 2  107-142    DVAIHSNSR-----------RSPLVPGII--TVID---TETVGEGQV-LVSED
   WD 3  146-185    DGIVAHFPA-----------HEKPVCCMA--FNTSGMLLVTTDTLGHDFHVFQ
   WD 4  189-238    HPWSSSQCAVHHLYTLHRGETEAKVQDIC--FSHDCRWVVVSTLRGT-SHVFP

   WD40 Template    GECLRTLSG-----------HTSGVTSVS--FSPDGKRLVSGSEDGT-IKVWD