Input parameters:

  Query = ENSP00000385059 (Len=923)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000385059, Len=923):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDGFAGSLDDSISAASTSDVQDRLSALESRVQQQEDEITVLKAALADVLRRLAISEDHVASVKKSVSSKGQPSPRAVIPM 80  
WD40-rpts                                                                                      

Query       81 SCITNGSGANRKPSHTSAVSIAGKETLSSAAKSIKRPSPAEKSHNSWENSDDSRNKLSKIPSTPKLIPKVTKTADKHKDV 160 
WD40-rpts                                                                                      

Query      161 IINQEGEYIKMFMRGRPITMFIPSDVDNYDDIRTELPPEKLKLEWAYGYRGKDCRANVYLLPTGKIVYFIASVVVLFNYE 240 
WD40-rpts                                                                                    (_

Query      241 ERTQRHYLGHTDCVKCLAIHPDKIRIATGQIAGVDKDGRPLQPHVRVWDSVTLSTLQIIGLGTFERGVGCLDFSKADSGV 320 
WD40-rpts      ______________________WD 1______________________)(_____________________WD 2_____

Query      321 HLCIIDDSNEHMLTVWDWQKKAKGAEIKTTNEVVLAVEFHPTDANTIITCGKSHIFFWTWSGNSLTRKQGIFGKYEKPKF 400 
WD40-rpts      ________________)   (_________________WD 3________________)(____________________

Query      401 VQCLAFLGNGDVLTGDSGGVMLIWSKTTVEPTPGKGPKGVYQISKQIKAHDGSVFTLCQMRNGMLLTGGGKDRKIILWDH 480 
WD40-rpts      WD 4____________________)               (_________________WD 5________________)(

Query      481 DLNPEREIEVPDQYGTIRAVAEGKADQFLVGTSRNFILRGTFNDGFQIEVQGHTDELWGLATHPFKDLLLTCAQDRQVCL 560 
WD40-rpts      ___________________WD 6__________________)(_________________WD 7________________

Query      561 WNSMEHRLEWTRLVDEPGHCADFHPSGTVVAIGTHSGRWFVLDAETRDLVSIHTDGNEQLSVMRYSIDGTFLAVGSHDNF 640 
WD40-rpts      _)(__________________WD 8_________________)   (_________________WD 9____________

Query      641 IYLYVVSENGRKYSRYGRCTGHSSYITHLDWSPDNKYIMSNSGDYEILYWDIPNGCKLIRNRSDCKDIDWTTYTCVLGFQ 720 
WD40-rpts      ____)       (_________________WD10________________)                         (___

Query      721 VFGVWPEGSDGTDINALVRSHNRKVIAVADDFCKVHLFQYPCSKAKAPSHKYSAHSSHVTNVSFTHNDSHLISTGGKDMS 800 
WD40-rpts      ________________WD11__________________)      (_________________WD12_____________

Query      801 IIQWKLVEKLSLPQNETVADTTLTKAPVSSTESVIQSNTPTPPPSQPLNETAEEESRISSSPTLLENSLEQTVEPSEDHS 880 
WD40-rpts      ____)                                    (_______________WD13_______________)   

Query      881 EEESEEGSGDLGEPLYEEPCNEISKEQAKATLLEDQQDPSPSS 923 
WD40-rpts                                                 

13 WD40-repeats found in QUERY=ENSP00000385059 (Len=923):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  8   239-289      6.56  385.78  0.00039       35.0%     53.66
  WD 2:  Seg 12   290-337      5.84  355.87  0.00100       22.5%     47.09
  WD 3:  Seg 16   341-379      7.14  409.55  0.00019       15.0%     56.23
  WD 4:  Seg 20   380-425      5.03  322.61  0.00279       17.5%     48.36
  WD 5:  Seg 24   441-479      7.42  421.05  0.00013       22.5%     52.48
  WD 6:  Seg 28   480-522      5.74  351.87  0.00113       12.5%     52.97
  WD 7:  Seg 32   523-562      9.14  492.42  1.4e-05       17.5%     58.20
  WD 8:  Seg 36   563-603      6.67  390.00  0.00035       22.5%     57.97
  WD 9:  Seg 40   607-645      7.81  437.07  8.0e-05       20.0%     58.20
  WD10:  Seg 44   653-691      8.59  469.61  2.9e-05       35.0%     52.61
  WD11:  Seg 50   717-759      5.81  354.71  0.00103        7.5%     56.22
  WD12:  Seg 54   766-805      6.50  383.32  0.00042       30.0%     50.76
  WD13:  Seg 59   842-877      4.45  298.36  0.00592       17.5%     25.39

Multiple sequence alignment of 13 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  239-289    YE-------ERT----QRHY---LGHTDCVKCLAIHPDKI----R-IATGQIAGVDKDGRPLQPHVRVWD
   WD 2  290-337    SV-------T-LSTLQIIGL---GTFERGVGCLDFSKADSGVHLC-IIDDSNEH----------MLTVWD
   WD 3  341-379    -K-------A-K----GAEI---KTTNEVVLAVEFHPTDA----N-TIITCGKS----------HIFFWT
   WD 4  380-425    WSGNSLTRKQ-G----IFGK---YEKPKFVQCLAFLGNGD----V-LT-GDSGG----------VMLIWS
   WD 5  441-479    -Y-------Q-I----SKQI---KAHDGSVFTLCQMRNGM----L-LTGGGKDR----------KIILWD
   WD 6  480-522    HD----LNPE-R----EIEV---PDQYGTIRAVAEGKADQ----F-LVGTSRNF----------ILRGTF
   WD 7  523-562    ND-------G-F----QIEV---QGHTDELWGLATHPFKD----L-LLTCAQDR----------QVCLWN
   WD 8  563-603    SM-------EHR----LEWT---RLVDEPGHCADFHPSGT----V-VAIGTHSG----------RWFVLD
   WD 9  607-645    -R-------D-L----VSIH---TDGNEQLSVMRYSIDGT----F-LAVGSHDN----------FIYLYV
   WD10  653-691    -Y-------S-R----YGRC---TGHSSYITHLDWSPDNK----Y-IMSNSGDY----------EILYWD
   WD11  717-759    LG-------F-Q----VFGVWPEGSDGTDINALVRSHNRK----V-IAVADDFC----------KVHLFQ
   WD12  766-805    -K-------A-P----SHKY---SAHSSHVTNVSFTHNDS----HLISTGGKDM----------SIIQWK
   WD13  842-877    -P-------P-P----SQPL---NETAEEESRISSSPT--------LLENSLEQ----------TVEPSE

   WD40 Template    TG-------E-C----LRTL---SGHTSGVTSVSFSPDGK----R-LVSGSEDG----------TIKVWD