Input parameters:

  Query = ENSP00000385755 (Len=511)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000385755, Len=511):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKRLIDKS 80  
WD40-rpts                            (_________________WD 1________________)        (__________

Query       81 RVTCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSP 160 
WD40-rpts      _______WD 2________________)(___________WD 3___________)   (_________________WD 

Query      161 DGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFVDCRVIARGHGHKSWVSVV 240 
WD40-rpts      4________________)   (_________________WD 5________________)   (________________

Query      241 AFDPYTTSVEEGDPMEFSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFP 320 
WD40-rpts      ____WD 6____________________)(___________________WD 7__________________)        

Query      321 HQPLSRARTHTNVMNATSPPAGSNGNSVTTPGNSVPPPLPRSNSLPHSAVSNAGSKSSVMDGAIASGVSKFATLSLHDRK 400 
WD40-rpts      (__________________WD 8_________________)    (_________________WD 9_____________

Query      401 ERHHEKDHKRNHSMGHISSKSSDKLNLVTKTKTDPAKTLGTPLCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTAC 480 
WD40-rpts      ___)_______________WD10________________)            (________________WD11_______

Query      481 QEGFICTWGRPGKVGSLSSPSQASSPGGTVV 511 
WD40-rpts      ________)                      

11 WD40-repeats found in QUERY=ENSP00000385755 (Len=511):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    23-61       5.61  346.53  0.00133       15.0%      4.55
  WD 2:  Seg  6    70-108      6.32  375.87  0.00054       22.5%     55.21
  WD 3:  Seg 10   109-136      3.79  271.22  0.01370       10.0%     34.86
  WD 4:  Seg 13   140-178      9.15  492.61  1.4e-05       30.0%     53.70
  WD 5:  Seg 17   182-220      9.92  524.45  5.3e-06       37.5%     56.09
  WD 6:  Seg 21   224-269      6.23  372.04  0.00060       22.5%     43.97
  WD 7:  Seg 25   270-312      6.84  397.32  0.00027       22.5%     52.79
  WD 8:  Seg 29   321-361      5.95  360.49  0.00086       12.5%     32.22
  WD 9:  Seg 32   366-404      4.35  294.35  0.00670       10.0%     43.75
  WD10:  Seg 35   402-440      6.28  374.07  0.00057       17.5%     21.76
  WD11:  Seg 37   453-489      5.18  328.66  0.00231       22.5%     43.50

Multiple sequence alignment of 11 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   23-61     -Y-SRPNRVPFNSQGSNPVRVSF--VNL--ND-QSG-------NGDRLCFNVG
   WD 2   70-108    KG-VRKRLI--DKSRVTCVKWVP--GSE--SLFLVA-------HSSGNMYLYN
   WD 3  109-136    -------------VEHTCGTTAP--HYQ--LL-KQG-------ESFAVHTCKS
   WD 4  140-178    -R-NPLLKWTVGEGALNEFAFSP--DGK--FL-ACV-------SQDGFLRVFN
   WD 5  182-220    -V-ELHGTMKSYFGGLLCVCWSP--DGK--YI-VTG-------GEDDLVTVWS
   WD 6  224-269    -C-RVIARGHGHKSWVSVVAFDP--YTT--SV-EEGDPMEFSGSDEDFQDLLH
   WD 7  270-312    FGRDRANSTQSRLSKRNSTDSRP--VSVTYRF-GSV-------GQDTQLCLWD
   WD 8  321-361    -H-QPLSRARTHTNVMNATSPPAGSNGN--SV-TTP-------GNSVPPPLPR
   WD 9  366-404    -P-HSAVSNAGSKSSVMDGAIAS--GVS--KF-ATL-------SLHDRKERHH
   WD10  402-440    -R-HHEKDHKRNHSMGHISSKSS--DKL--NL-VTK-------TKTDPAKTLG
   WD11  453-489    -L-EPLICKKIAHERLTVLIFLE--DC----I-VTA-------CQEGFICTWG

   WD40 Template    TG-ECLRTLSGHTSGVTSVSFSP--DGK--RL-VSG-------SEDGTIKVWD